RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 PINX1Q96BK5 328 aaKnown RBP16.08■□□□□ 0.16
PKP3-211ENST00000534401 DAZ1Q9NQZ3 744 aaKnown RBP16.08■□□□□ 0.16
PKP3-211ENST00000534401 MRPL36Q9P0J6 103 aaKnown RBP16.08■□□□□ 0.16
PKP3-211ENST00000534401 TRAV25A0A0B4J276 109 aa16.07■□□□□ 0.16
PKP3-211ENST00000534401 C15orf62A8K5M9 175 aa16.07■□□□□ 0.16
PKP3-211ENST00000534401 CEBPZOSA8MTT3 80 aa16.07■□□□□ 0.16
PKP3-211ENST00000534401 RELQ04864 619 aaPredicted RBP16.07■□□□□ 0.16
PKP3-211ENST00000534401 MLANAQ16655 118 aa16.07■□□□□ 0.16
PKP3-211ENST00000534401 UBAC2Q8NBM4 344 aa16.07■□□□□ 0.16
PKP3-211ENST00000534401 OR4X1Q8NH49 305 aa16.07■□□□□ 0.16
PKP3-211ENST00000534401 RNASEH2CQ8TDP1 164 aaKnown RBP16.07■□□□□ 0.16
PKP3-211ENST00000534401 DYNLRB2Q8TF09 96 aa16.07■□□□□ 0.16
PKP3-211ENST00000534401 S100ZQ8WXG8 99 aa16.07■□□□□ 0.16
PKP3-211ENST00000534401 LINC00854A0A1B0GVQ3 168 aa16.06■□□□□ 0.16
PKP3-211ENST00000534401 FAM90A26D6RGX4 464 aa16.06■□□□□ 0.16
PKP3-211ENST00000534401 LYRM1O43325 122 aa16.06■□□□□ 0.16
PKP3-211ENST00000534401 ATP5IP56385 69 aaPredicted RBP16.06■□□□□ 0.16
PKP3-211ENST00000534401 C11orf87Q6NUJ2 197 aa16.06■□□□□ 0.16
PKP3-211ENST00000534401 TMEM61Q8N0U2 210 aa16.06■□□□□ 0.16
PKP3-211ENST00000534401 SLC24A4Q8NFF2 622 aa16.06■□□□□ 0.16
PKP3-211ENST00000534401 RBKSQ9H477 322 aa16.06■□□□□ 0.16
PKP3-211ENST00000534401 PTTG2Q9NZH5 202 aa16.06■□□□□ 0.16
PKP3-211ENST00000534401 U3KQ87 197 aa16.06■□□□□ 0.16
PKP3-211ENST00000534401 GNG7O60262 68 aa16.05■□□□□ 0.16
PKP3-211ENST00000534401 CLN5O75503 358 aa16.05■□□□□ 0.16
PKP3-211ENST00000534401 OR4E1P0C645 316 aa16.05■□□□□ 0.16
PKP3-211ENST00000534401 IGHV4-30-4P0DP06 118 aa16.05■□□□□ 0.16
PKP3-211ENST00000534401 DHRS2Q13268 280 aa16.05■□□□□ 0.16
PKP3-211ENST00000534401 LYG2Q86SG7 212 aa16.05■□□□□ 0.16
PKP3-211ENST00000534401 HIPK2Q9H2X6 1198 aa16.05■□□□□ 0.16
PKP3-211ENST00000534401 BATF3Q9NR55 127 aa16.05■□□□□ 0.16
PKP3-211ENST00000534401 STAB2Q8WWQ8 2551 aa16.05■□□□□ 0.16
PKP3-211ENST00000534401 FRMD6-AS1P0C7T7 363 aa16.04■□□□□ 0.16
PKP3-211ENST00000534401 NOXA1Q86UR1 476 aa16.04■□□□□ 0.16
PKP3-211ENST00000534401 TMEM116Q8NCL8 245 aa16.04■□□□□ 0.16
PKP3-211ENST00000534401 DTD1Q8TEA8 209 aa16.04■□□□□ 0.16
PKP3-211ENST00000534401 WDR89Q96FK6 387 aaPredicted RBP16.04■□□□□ 0.16
PKP3-211ENST00000534401 SLC25A4P12235 298 aa16.03■□□□□ 0.16
PKP3-211ENST00000534401 NPY1RP25929 384 aa16.03■□□□□ 0.16
PKP3-211ENST00000534401 GGNBP1Q5YKI7 109 aa16.03■□□□□ 0.16
PKP3-211ENST00000534401 BTNL8Q6UX41 500 aa16.03■□□□□ 0.16
PKP3-211ENST00000534401 OR1S1Q8NH92 325 aa16.03■□□□□ 0.16
PKP3-211ENST00000534401 SMPXQ9UHP9 88 aa16.03■□□□□ 0.16
PKP3-211ENST00000534401 RPS10-NUDT3A0A1W2PQS6 291 aa16.02■□□□□ 0.16
PKP3-211ENST00000534401 NXPH3O95157 252 aa16.02■□□□□ 0.16
PKP3-211ENST00000534401 IGKV1-17P01599 117 aa16.02■□□□□ 0.16
PKP3-211ENST00000534401 ANXA7P20073 488 aaKnown RBP16.02■□□□□ 0.16
PKP3-211ENST00000534401 OPRK1P41145 380 aa16.02■□□□□ 0.16
PKP3-211ENST00000534401 PRSS54Q6PEW0 395 aa16.02■□□□□ 0.16
PKP3-211ENST00000534401 TOMM20LQ6UXN7 152 aa16.02■□□□□ 0.16
PKP3-211ENST00000534401 LINC00322Q6ZN03 302 aaPredicted RBP16.02■□□□□ 0.16
PKP3-211ENST00000534401 ZNF600Q6ZNG1 722 aa16.02■□□□□ 0.16
PKP3-211ENST00000534401 GTSCR1Q86UQ5 136 aa16.02■□□□□ 0.16
PKP3-211ENST00000534401 SBSPONQ8IVN8 264 aa16.02■□□□□ 0.16
PKP3-211ENST00000534401 ZFAND3Q9H8U3 227 aa16.02■□□□□ 0.16
PKP3-211ENST00000534401 TCRBP04435 133 aa16.01■□□□□ 0.15
PKP3-211ENST00000534401 HOXB5P09067 269 aa16.01■□□□□ 0.15
PKP3-211ENST00000534401 CD7P09564 240 aa16.01■□□□□ 0.15
PKP3-211ENST00000534401 NEURL2Q9BR09 285 aa16.01■□□□□ 0.15
PKP3-211ENST00000534401 C20orf24Q9BUV8 137 aa16.01■□□□□ 0.15
PKP3-211ENST00000534401 TBC1D24Q9ULP9 559 aa16.01■□□□□ 0.15
PKP3-211ENST00000534401 TENM3Q9P273 2699 aa16.01■□□□□ 0.15
PKP3-211ENST00000534401 TRAV30A0A087WSZ9 112 aa16■□□□□ 0.15
PKP3-211ENST00000534401 IGHV7-4-1A0A0J9YVY3 117 aa16■□□□□ 0.15
PKP3-211ENST00000534401 TSPAN4O14817 238 aa16■□□□□ 0.15
PKP3-211ENST00000534401 ID3Q02535 119 aa16■□□□□ 0.15
PKP3-211ENST00000534401 MITD1Q8WV92 249 aa16■□□□□ 0.15
PKP3-211ENST00000534401 C20orf85Q9H1P6 137 aa16■□□□□ 0.15
PKP3-211ENST00000534401 IGHV3OR16-8A0A075B7F1 116 aa15.99■□□□□ 0.15
PKP3-211ENST00000534401 CHEK1O14757 476 aa15.99■□□□□ 0.15
PKP3-211ENST00000534401 ADAP1O75689 374 aa15.99■□□□□ 0.15
PKP3-211ENST00000534401 IFNA10P01566 189 aa15.99■□□□□ 0.15
PKP3-211ENST00000534401 IGLC1P0CG04 106 aa15.99■□□□□ 0.15
PKP3-211ENST00000534401 ASAH1Q13510 395 aa15.99■□□□□ 0.15
PKP3-211ENST00000534401 ETFRF1Q6IPR1 90 aa15.99■□□□□ 0.15
PKP3-211ENST00000534401 COQ8AQ8NI60 647 aa15.99■□□□□ 0.15
PKP3-211ENST00000534401 ASCL2Q99929 193 aa15.99■□□□□ 0.15
PKP3-211ENST00000534401 TRAV14DV4A0A0A6YYC5 116 aa15.98■□□□□ 0.15
PKP3-211ENST00000534401 ZNF207O43670 478 aaKnown RBP15.98■□□□□ 0.15
PKP3-211ENST00000534401 MED6O75586 246 aa15.98■□□□□ 0.15
PKP3-211ENST00000534401 SCAF4O95104 1147 aaKnown RBP15.98■□□□□ 0.15
PKP3-211ENST00000534401 CD81P60033 236 aa15.98■□□□□ 0.15
PKP3-211ENST00000534401 YPEL3P61236 119 aaPredicted RBP15.98■□□□□ 0.15
PKP3-211ENST00000534401 GUCA2BQ16661 112 aa15.98■□□□□ 0.15
PKP3-211ENST00000534401 FAM90A2PQ658T7 463 aa15.98■□□□□ 0.15
PKP3-211ENST00000534401 SPAG8Q99932 426 aaPredicted RBP15.98■□□□□ 0.15
PKP3-211ENST00000534401 RHPN1-AS1Q9BWJ2 59 aa15.98■□□□□ 0.15
PKP3-211ENST00000534401 WDR12Q9GZL7 423 aaKnown RBP15.98■□□□□ 0.15
PKP3-211ENST00000534401 VSIRQ9H7M9 311 aa15.98■□□□□ 0.15
PKP3-211ENST00000534401 PUS1Q9Y606 427 aaKnown RBP eCLIP15.98■□□□□ 0.15
PKP3-211ENST00000534401 SELENOKQ9Y6D0 94 aa15.98■□□□□ 0.15
PKP3-211ENST00000534401 MPTX1A8MV57 137 aa15.97■□□□□ 0.15
PKP3-211ENST00000534401 SYNGR2O43760 224 aa15.97■□□□□ 0.15
PKP3-211ENST00000534401 GPX4P36969 197 aaPredicted RBP15.97■□□□□ 0.15
PKP3-211ENST00000534401 RND2P52198 227 aa15.97■□□□□ 0.15
PKP3-211ENST00000534401 ZNF846Q147U1 533 aa15.97■□□□□ 0.15
PKP3-211ENST00000534401 C4orf46Q504U0 113 aa15.97■□□□□ 0.15
PKP3-211ENST00000534401 OR4D5Q8NGN0 318 aa15.97■□□□□ 0.15
PKP3-211ENST00000534401 OR1S2Q8NGQ3 325 aa15.97■□□□□ 0.15
PKP3-211ENST00000534401 CIB3Q96Q77 187 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms