RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, human

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CHKA-208	ENST00000533910	IGHV4-61	A0A0C4DH41	118 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	SRRM4	A7MD48	611 aa	Known RBP	4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	PMS2P5	A8MQ11	134 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	OOSP1	A8MZH6	123 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	INS-IGF2	F8WCM5	200 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	UPK2	O00526	184 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	FOXH1	O75593	365 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	CST7	O76096	145 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	KBTBD11	O94819	623 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	IGLV2-23	P01705	113 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	SEC11B	P0C7V7	166 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	VDAC2	P45880	294 aa	Predicted RBP	4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	NPBWR1	P48145	328 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	REG1B	P48304	166 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	DYNLT3	P51808	116 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	ATP5J2	P56134	94 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	DLX1	P56177	255 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	DSCR9	P59020	149 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	ARF6	P62330	175 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	TMEM267	Q0VDI3	215 aa	Predicted RBP	4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	FAM74A1	Q5RGS3	127 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	LDLRAD2	Q5SZI1	272 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	TPTE2P1	Q5T6R2	138 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	EIF5AL1	Q6IS14	154 aa	Known RBP	4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	FAM159A	Q6UWV7	190 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	VMO1	Q7Z5L0	202 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	OR1S2	Q8NGQ3	325 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	OR5C1	Q8NGR4	320 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	OR4A16	Q8NH70	328 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	OR4A5	Q8NH83	315 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	VSTM2A	Q8TAG5	236 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	TMEM167A	Q8TBQ9	72 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	TMED6	Q8WW62	240 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	LHX4	Q969G2	390 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	FLYWCH2	Q96CP2	140 aa	Known RBP	4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	ATP5S	Q99766	215 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	PARD6G	Q9BYG4	376 aa	Predicted RBP	4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	NPFFR1	Q9GZQ6	430 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	SIRT7	Q9NRC8	400 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	TCF19	Q9Y242	345 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	CENPE	Q02224	2701 aa		4.55	□□□□□ -1.68
CHKA-208	ENST00000533910	CRYBG3	Q68DQ2	2970 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	NAV3	Q8IVL0	2385 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	HELZ2	Q9BYK8	2649 aa	Known RBP	4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	RAB19	A4D1S5	217 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	CGB1	A6NKQ9	187 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	LINC01548	A6NM66	108 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	C15orf62	A8K5M9	175 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	CEBPZOS	A8MTT3	80 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	LEUTX	A8MZ59	168 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	PRSS46	E5RG02	174 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	RNASEK-C17orf49	H0YIS7	233 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910		H7C2Y5	167 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	RBMXL2	O75526	392 aa	Known RBP	4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	FABP1	P07148	127 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	METTL15P1	P0C7V9	234 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	FAM157C	P0CG43	387 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	USF1	P22415	310 aa	Predicted RBP	4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	HTR1D	P28221	377 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	CEACAM3	P40198	252 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	LGALS7	P47929	136 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	SULT1A2	P50226	295 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	UBE2G2	P60604	165 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	HSPE1	P61604	102 aa	Known RBP	4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	HBG1	P69891	147 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	HBG2	P69892	147 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	LCN2	P80188	198 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	PRCD	Q00LT1	54 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	PRB3	Q04118	309 aa	Predicted RBP	4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	SLC38A11	Q08AI6	406 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	ARL16	Q0P5N6	197 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	KLRD1	Q13241	179 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	CLINT1	Q14677	625 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	MRGPRG-AS1	Q2M3A8	158 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	VMA21	Q3ZAQ7	101 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	SPANXN5	Q5MJ07	72 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	PIK3CD-AS1	Q5SR53	167 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	MINOS1	Q5TGZ0	78 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	PDZD9	Q8IXQ8	264 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	OR5B3	Q8NH48	314 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	PCNP	Q8WW12	178 aa	Known RBP	4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	RPE	Q96AT9	228 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	PINX1	Q96BK5	328 aa	Known RBP	4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	CXorf58	Q96LI9	332 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	TBX15	Q96SF7	602 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	TSNAX	Q99598	290 aa	Known RBP	4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	RNF5	Q99942	180 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	MMP26	Q9NRE1	261 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	MSRB1	Q9NZV6	116 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	DPM3	Q9P2X0	92 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	NUP50	Q9UKX7	468 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	INSIG2	Q9Y5U4	225 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	MINOS1-NBL1	R4GNA1	71 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	WNK2	Q9Y3S1	2297 aa		4.54	□□□□□ -1.68
CHKA-208	ENST00000533910	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	4.54	□□□□□ -1.68	3e-7	■■■■□ 21.3
CHKA-208	ENST00000533910	ABCA12	Q86UK0	2595 aa		4.53	□□□□□ -1.68
CHKA-208	ENST00000533910	IGHV4-30-2	A0A087WSY4	118 aa		4.53	□□□□□ -1.68
CHKA-208	ENST00000533910		A0A096LNT2	108 aa		4.53	□□□□□ -1.68
CHKA-208	ENST00000533910		A0A0U1RRA0	63 aa		4.53	□□□□□ -1.68

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