RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 CENPSQ8N2Z9 138 aa7.4□□□□□ -1.22
NUP98-220ENST00000533346 TMEM116Q8NCL8 245 aa7.4□□□□□ -1.22
NUP98-220ENST00000533346 DYNLRB2Q8TF09 96 aa7.4□□□□□ -1.22
NUP98-220ENST00000533346 MISP3Q96FF7 219 aa7.4□□□□□ -1.22
NUP98-220ENST00000533346 FAM110AQ9BQ89 295 aa7.4□□□□□ -1.22
NUP98-220ENST00000533346 TM2D3Q9BRN9 247 aa7.4□□□□□ -1.22
NUP98-220ENST00000533346 HIPK2Q9H2X6 1198 aa7.4□□□□□ -1.22
NUP98-220ENST00000533346 FNDC4Q9H6D8 234 aaPredicted RBP7.4□□□□□ -1.22
NUP98-220ENST00000533346 EPPK1P58107 5090 aaKnown RBP7.4□□□□□ -1.23
NUP98-220ENST00000533346 RPS10-NUDT3A0A1W2PQS6 291 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 TSPAN4O14817 238 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 GNG7O60262 68 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 CD5P06127 495 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 SLC25A4P12235 298 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 PPP1R1AQ13522 171 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 ANKRD55Q3KP44 614 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 ZNF600Q6ZNG1 722 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 SBSPONQ8IVN8 264 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 TMEM61Q8N0U2 210 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 SLC24A4Q8NFF2 622 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 TMEM170AQ8WVE7 144 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 SPAG8Q99932 426 aaPredicted RBP7.39□□□□□ -1.23
NUP98-220ENST00000533346 CCDC32Q9BV29 185 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 SMPXQ9UHP9 88 aa7.39□□□□□ -1.23
NUP98-220ENST00000533346 IGHV3-21A0A0B4J1V1 117 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 C9orf170A2RU37 121 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 PLA2G10O15496 165 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 INPP1P49441 399 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 SPINK9Q5DT21 86 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 FAM90A2PQ658T7 463 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 ETFRF1Q6IPR1 90 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 TMED4Q7Z7H5 227 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 S100ZQ8WXG8 99 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 CACNG8Q8WXS5 425 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 PINX1Q96BK5 328 aaKnown RBP7.38□□□□□ -1.23
NUP98-220ENST00000533346 WWC2-AS2Q96NR7 200 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 NEURL2Q9BR09 285 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 VSIRQ9H7M9 311 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 ZFAND3Q9H8U3 227 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 HEYLQ9NQ87 328 aaPredicted RBP7.38□□□□□ -1.23
NUP98-220ENST00000533346 U3KQK5 164 aa7.38□□□□□ -1.23
NUP98-220ENST00000533346 TRAV14DV4A0A0A6YYC5 116 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 IGHV7-4-1A0A0J9YVY3 117 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 CEBPZOSA8MTT3 80 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 CHEK1O14757 476 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 SCGB2A1O75556 95 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 NPY1RP25929 384 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 GPX4P36969 197 aaPredicted RBP7.37□□□□□ -1.23
NUP98-220ENST00000533346 OPRK1P41145 380 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 YPEL3P61236 119 aaPredicted RBP7.37□□□□□ -1.23
NUP98-220ENST00000533346 ID3Q02535 119 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 MLANAQ16655 118 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 LAMTOR1Q6IAA8 161 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 C11orf87Q6NUJ2 197 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 PRSS54Q6PEW0 395 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 BTNL8Q6UX41 500 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 TOMM20LQ6UXN7 152 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 UBAC2Q8NBM4 344 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 DTD1Q8TEA8 209 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 WDR89Q96FK6 387 aaPredicted RBP7.37□□□□□ -1.23
NUP98-220ENST00000533346 GINS3Q9BRX5 216 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 RBKSQ9H477 322 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 PRR13Q9NZ81 148 aa7.37□□□□□ -1.23
NUP98-220ENST00000533346 MRPL36Q9P0J6 103 aaKnown RBP7.37□□□□□ -1.23
NUP98-220ENST00000533346 TRAV2A0A0B4J234 112 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 IGHV3-35A0A0C4DH35 117 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 LYRM1O43325 122 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 MED6O75586 246 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 SCAF4O95104 1147 aaKnown RBP7.36□□□□□ -1.23
NUP98-220ENST00000533346 IGKV1-17P01599 117 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 CD7P09564 240 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 OR4E1P0C645 316 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 IGLC1P0CG04 106 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 VAMP1P23763 118 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 CMC4P56277 68 aaPredicted RBP7.36□□□□□ -1.23
NUP98-220ENST00000533346 CD81P60033 236 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 RBPMS2Q6ZRY4 209 aaKnown RBP7.36□□□□□ -1.23
NUP98-220ENST00000533346 SLC16A13Q7RTY0 426 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 LYG2Q86SG7 212 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 OR1S2Q8NGQ3 325 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 CIB3Q96Q77 187 aaPredicted RBP7.36□□□□□ -1.23
NUP98-220ENST00000533346 BATF3Q9NR55 127 aa7.36□□□□□ -1.23
NUP98-220ENST00000533346 OR11H12B2RN74 326 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 CRYBB3P26998 211 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 BMI1P35226 326 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 DHRS2Q13268 280 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 HAGHQ16775 308 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 GGNBP1Q5YKI7 109 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 OR52B4Q8NGK2 314 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 OR1S1Q8NH92 325 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 COQ8AQ8NI60 647 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 MITD1Q8WV92 249 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 C20orf24Q9BUV8 137 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 RHPN1-AS1Q9BWJ2 59 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 ZMAT4Q9H898 229 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 PTTG2Q9NZH5 202 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 PUS1Q9Y606 427 aaKnown RBP eCLIP7.35□□□□□ -1.23
NUP98-220ENST00000533346 U3KQE9 123 aa7.35□□□□□ -1.23
NUP98-220ENST00000533346 BIRC6Q9NR09 4857 aa7.34□□□□□ -1.23
NUP98-220ENST00000533346 A0A1W2PS18 150 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms