RNA–Protein interactions for RNA: ENST00000533229.1

CACNA1E-208, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

TSL 1 (best)

Gene CACNA1E, Length 2,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-208ENST00000533229 IGF2RP11717 2491 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 IGHV2-26A0A0B4J1V2 119 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 C9JCJ5 164 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 IGLV1-47P01700 117 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 AMBPP02760 352 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 MC5RP33032 325 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 C19orf35Q6ZS72 473 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 C19orf24Q9BVV8 132 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 SLC25A2Q9BXI2 301 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 MSRB2Q9Y3D2 182 aa12.34□□□□□ -0.43
CACNA1E-208ENST00000533229 TACC2O95359 2948 aa12.33□□□□□ -0.44
CACNA1E-208ENST00000533229 C8orf88P0DMB2 117 aa12.33□□□□□ -0.44
CACNA1E-208ENST00000533229 CA7P43166 264 aa12.33□□□□□ -0.44
CACNA1E-208ENST00000533229 PDLIM4P50479 330 aa12.33□□□□□ -0.44
CACNA1E-208ENST00000533229 SUMO1P63165 101 aaKnown RBP12.33□□□□□ -0.44
CACNA1E-208ENST00000533229 VMA21Q3ZAQ7 101 aa12.33□□□□□ -0.44
CACNA1E-208ENST00000533229 PATE2Q6UY27 113 aa12.33□□□□□ -0.44
CACNA1E-208ENST00000533229 RNASEH2CQ8TDP1 164 aaKnown RBP12.33□□□□□ -0.44
CACNA1E-208ENST00000533229 ARL2-SNX15V9GYD0 113 aa12.33□□□□□ -0.44
CACNA1E-208ENST00000533229 HELTA6NFD8 242 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 APELAP0DMC3 54 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 LGALS4P56470 323 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 DNLZQ5SXM8 178 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 DNAJC4Q9NNZ3 241 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 TRAPPC1Q9Y5R8 145 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 NAV3Q8IVL0 2385 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 IGLC7A0M8Q6 106 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 DDTP30046 118 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 LGALS7P47929 136 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 MFAP2P55001 183 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 TAS2R45P59539 299 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 PKIAP61925 76 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 CENPWQ5EE01 88 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 HCP5Q6MZN7 132 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 RAXQ9Y2V3 346 aa12.32□□□□□ -0.44
CACNA1E-208ENST00000533229 CCL21O00585 134 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 LY6HO94772 140 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 CHODLQ9H9P2 273 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 LY96Q9Y6Y9 160 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 MALRD1Q5VYJ5 2156 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 A0A1B0GV90 55 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 TCRBV4S1A1TA0A5B7 111 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 BUB1B-PAK6H3BSN5 160 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 CRYGBP07316 175 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 FRMD6-AS1P0C7T7 363 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 PYYP10082 97 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 GZMBP10144 247 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 CNN1P51911 297 aaKnown RBP12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 FBXL19-AS1Q494R0 122 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 OR5R1Q8NH85 324 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 IL36BQ9NZH7 164 aa12.31□□□□□ -0.44
CACNA1E-208ENST00000533229 PLXNB1O43157 2135 aa12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 IGHV1-3A0A0C4DH29 117 aa12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 A0A1B0GUS0 222 aa12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 C22orf46C9J442 243 aa12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 FSTL3O95633 263 aa12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 GNG4P50150 75 aa12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 SUB1P53999 127 aaKnown RBP eCLIP12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 ZNF672Q499Z4 452 aaPredicted RBP12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 REC114Q7Z4M0 266 aa12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 OR5AU1Q8NGC0 362 aa12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 MRPL32Q9BYC8 188 aaKnown RBP12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 ZNF355PQ9NSJ1 428 aa12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 V9GYV3 84 aa12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 ANKHD1Q8IWZ3 2542 aaKnown RBP12.3□□□□□ -0.44
CACNA1E-208ENST00000533229 TPRP12270 2363 aaKnown RBP12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 PPIAL4CA0A0B4J2A2 164 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 A0A1W2PRE2 83 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 SNRPCP09234 159 aaKnown RBP12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 PPIAL4GP0DN37 164 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 COX7A1P24310 79 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 CASP6P55212 293 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 ERVFC1-1P60608 527 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 JOSD1Q15040 202 aaPredicted RBP12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 TNXAQ16473 311 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 TEX45Q8NA69 505 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 THAP8Q8NA92 274 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 TNFRSF14Q92956 283 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 INSIG2Q9Y5U4 225 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 SVEP1Q4LDE5 3571 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 IGLV2-8P01709 118 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 PAX1P15863 534 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 PRRX1P54821 245 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 YPEL3P61236 119 aaPredicted RBP12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 UBE2L3P68036 154 aaKnown RBP12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 ADORA2A-AS1P86434 159 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 LHFPL4Q7Z7J7 247 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 LINC00479Q96M42 142 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 CLEC7AQ9BXN2 247 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 RNASE7Q9H1E1 156 aaKnown RBP12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 SIGLEC9Q9Y336 463 aa12.29□□□□□ -0.44
CACNA1E-208ENST00000533229 ATRXP46100 2492 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 CSMD1Q96PZ7 3565 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 IGHV3-21A0A0B4J1V1 117 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 COX7A2P2O60397 106 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 MOSP00540 346 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 CRYGCP07315 174 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 RNF224P0DH78 156 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 ADMP35318 185 aa12.28□□□□□ -0.44
CACNA1E-208ENST00000533229 LDLRAD2Q5SZI1 272 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms