RNA–Protein interactions for RNA: ENST00000533064.1

TRIM3-212, Transcript of tripartite motif containing 3, humanhuman

TSL 1 (best)

Gene TRIM3, Length 1,654 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-212ENST00000533064 THYN1Q9P016 225 aa11.17□□□□□ -0.62
TRIM3-212ENST00000533064 HIST1H1BP16401 226 aaKnown RBP11.16□□□□□ -0.62
TRIM3-212ENST00000533064 MISP3Q96FF7 219 aa11.16□□□□□ -0.62
TRIM3-212ENST00000533064 CITED4Q96RK1 184 aa11.16□□□□□ -0.62
TRIM3-212ENST00000533064 OPRK1P41145 380 aa11.15□□□□□ -0.62
TRIM3-212ENST00000533064 BLOC1S1P78537 153 aa11.15□□□□□ -0.62
TRIM3-212ENST00000533064 VWC2Q2TAL6 325 aa11.15□□□□□ -0.62
TRIM3-212ENST00000533064 OR2G3Q8NGZ4 309 aa11.15□□□□□ -0.62
TRIM3-212ENST00000533064 TMEM170AQ8WVE7 144 aa11.15□□□□□ -0.62
TRIM3-212ENST00000533064 GGACTQ9BVM4 153 aa11.15□□□□□ -0.62
TRIM3-212ENST00000533064 WDR61Q9GZS3 305 aaKnown RBP11.15□□□□□ -0.62
TRIM3-212ENST00000533064 UQCC1Q9NVA1 299 aa11.15□□□□□ -0.62
TRIM3-212ENST00000533064 UBE2L5PA0A1B0GUS4 154 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 UMAD1C9J7I0 102 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 H3BUA1 57 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 PRH1P02810 166 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 RUNX1Q01196 453 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 C19orf54Q5BKX5 351 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 ETFRF1Q6IPR1 90 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 C19orf35Q6ZS72 473 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 CENPVQ7Z7K6 275 aaPredicted RBP11.14□□□□□ -0.63
TRIM3-212ENST00000533064 PSMG3Q9BT73 122 aaPredicted RBP11.14□□□□□ -0.63
TRIM3-212ENST00000533064 PSMB11A5LHX3 300 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 MFSD2BA6NFX1 497 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 PRSS46E5RG02 174 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 NDUFA7O95182 113 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 PPIFP30405 207 aaKnown RBP11.14□□□□□ -0.63
TRIM3-212ENST00000533064 TMEM182Q6ZP80 229 aaPredicted RBP11.14□□□□□ -0.63
TRIM3-212ENST00000533064 OR4F5Q8NH21 305 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 TAF15Q92804 592 aaKnown RBP eCLIP11.14□□□□□ -0.63
TRIM3-212ENST00000533064 C16orf95Q9H693 158 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 SERTAD4Q9NUC0 356 aa11.14□□□□□ -0.63
TRIM3-212ENST00000533064 IGLV11-55A0A075B6I3 123 aa11.13□□□□□ -0.63
TRIM3-212ENST00000533064 NUDT19A8MXV4 375 aa11.13□□□□□ -0.63
TRIM3-212ENST00000533064 PF4V1P10720 104 aa11.13□□□□□ -0.63
TRIM3-212ENST00000533064 MFAP2P55001 183 aa11.13□□□□□ -0.63
TRIM3-212ENST00000533064 DLK1P80370 383 aa11.13□□□□□ -0.63
TRIM3-212ENST00000533064 PXDC1Q5TGL8 231 aa11.13□□□□□ -0.63
TRIM3-212ENST00000533064 TEX38Q6PEX7 206 aa11.13□□□□□ -0.63
TRIM3-212ENST00000533064 ZNF329Q86UD4 541 aa11.13□□□□□ -0.63
TRIM3-212ENST00000533064 TIMM9Q9Y5J7 89 aa11.13□□□□□ -0.63
TRIM3-212ENST00000533064 SOX15O60248 233 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 OR2J3O76001 311 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 TRGV3P03979 118 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 MDKP21741 143 aaPredicted RBP11.12□□□□□ -0.63
TRIM3-212ENST00000533064 GPX4P36969 197 aaPredicted RBP11.12□□□□□ -0.63
TRIM3-212ENST00000533064 CAMLGP49069 296 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 CD69Q07108 199 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 PVRIGQ6DKI7 326 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 Q6ZRG5 221 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 EIF4E3Q8N5X7 224 aaKnown RBP11.12□□□□□ -0.63
TRIM3-212ENST00000533064 CACNG8Q8WXS5 425 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 SLC35E1Q96K37 410 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 MS4A10Q96PG2 267 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 FANCD2OSQ96PS1 177 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 RSG1Q9BU20 258 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 FBXL7Q9UJT9 491 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 RFNGQ9Y644 331 aa11.12□□□□□ -0.63
TRIM3-212ENST00000533064 SMCO3A2RU48 225 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 TMEM89A2RUT3 159 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 MT-CO2P00403 227 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 IGHG4P01861 327 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 TPPP2P59282 170 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 RHOGP84095 191 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 SERF2P84101 59 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 SRSF2Q01130 221 aaKnown RBP11.11□□□□□ -0.63
TRIM3-212ENST00000533064 CFHR3Q02985 330 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 AKR1C8PQ5T2L2 129 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 SLC16A13Q7RTY0 426 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 COMMD1Q8N668 190 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 NECAP1Q8NC96 275 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 MARC2Q969Z3 335 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 DMRT1Q9Y5R6 373 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 TRBV9A0A0B4J1U6 114 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 ANKRD34BA5PLL1 514 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 FAM223BA6NKX1 122 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 FNDC10F2Z333 226 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 TEX46H3BTG2 121 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 BRI3O95415 125 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 IGLV1-40P01703 118 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 ELANEP08246 267 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 FGF7P21781 194 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 AKR1C1Q04828 323 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 KLK9Q2XQG4 91 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 BTNL8Q6UX41 500 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 DPPA3Q6W0C5 159 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 IL34Q6ZMJ4 242 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 FAM223AQ8IWN6 122 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 LINC01006Q8NI28 216 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 LYPD6BQ8NI32 183 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 KLK9Q9UKQ9 250 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 WDR83OSQ9Y284 106 aa11.11□□□□□ -0.63
TRIM3-212ENST00000533064 A0A0G2JLM5 398 aa11.1□□□□□ -0.63
TRIM3-212ENST00000533064 RAB19A4D1S5 217 aa11.1□□□□□ -0.63
TRIM3-212ENST00000533064 I3L2K1 104 aa11.1□□□□□ -0.63
TRIM3-212ENST00000533064 MPDU1O75352 247 aa11.1□□□□□ -0.63
TRIM3-212ENST00000533064 FHITP49789 147 aa11.1□□□□□ -0.63
TRIM3-212ENST00000533064 FOXE3Q13461 319 aa11.1□□□□□ -0.63
TRIM3-212ENST00000533064 C15orf32Q32M92 178 aa11.1□□□□□ -0.63
TRIM3-212ENST00000533064 ACSM6Q6P461 480 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms