RNA–Protein interactions for RNA: ENST00000532893.5

CDC27-209, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-209ENST00000532893 C1QTNF4Q9BXJ3 329 aa10.28□□□□□ -0.76
CDC27-209ENST00000532893 SCRT2Q9NQ03 307 aa10.28□□□□□ -0.76
CDC27-209ENST00000532893 EHFQ9NZC4 300 aa10.28□□□□□ -0.76
CDC27-209ENST00000532893 HTN3P15516 51 aa10.27□□□□□ -0.77
CDC27-209ENST00000532893 HSPE1P61604 102 aaKnown RBP10.27□□□□□ -0.77
CDC27-209ENST00000532893 PRCDQ00LT1 54 aa10.27□□□□□ -0.77
CDC27-209ENST00000532893 TBCEQ15813 527 aaPredicted RBP10.27□□□□□ -0.77
CDC27-209ENST00000532893 SPINK9Q5DT21 86 aa10.27□□□□□ -0.77
CDC27-209ENST00000532893 CMTM1Q8IZ96 169 aa10.27□□□□□ -0.77
CDC27-209ENST00000532893 OR5H6Q8NGV6 325 aa10.27□□□□□ -0.77
CDC27-209ENST00000532893 ZNF2Q9BSG1 426 aaPredicted RBP10.27□□□□□ -0.77
CDC27-209ENST00000532893 AUNIPQ9H7T9 357 aa10.27□□□□□ -0.77
CDC27-209ENST00000532893 HELTA6NFD8 242 aa10.26□□□□□ -0.77
CDC27-209ENST00000532893 SFXN4Q6P4A7 337 aa10.26□□□□□ -0.77
CDC27-209ENST00000532893 H2BFWTQ7Z2G1 175 aa10.26□□□□□ -0.77
CDC27-209ENST00000532893 TMEM230Q96A57 120 aa10.26□□□□□ -0.77
CDC27-209ENST00000532893 SLC25A38Q96DW6 304 aa10.26□□□□□ -0.77
CDC27-209ENST00000532893 NARS2Q96I59 477 aaKnown RBP10.26□□□□□ -0.77
CDC27-209ENST00000532893 SEC22AQ96IW7 307 aa10.26□□□□□ -0.77
CDC27-209ENST00000532893 TXNL4BQ9NX01 149 aaKnown RBP10.26□□□□□ -0.77
CDC27-209ENST00000532893 NACAE9PAV3 2078 aa10.26□□□□□ -0.77
CDC27-209ENST00000532893 IGHV3OR16-12A0A075B7B8 117 aa10.25□□□□□ -0.77
CDC27-209ENST00000532893 H3BMM0 161 aa10.25□□□□□ -0.77
CDC27-209ENST00000532893 GPR31O00270 319 aa10.25□□□□□ -0.77
CDC27-209ENST00000532893 PMP2P02689 132 aa10.25□□□□□ -0.77
CDC27-209ENST00000532893 FGF9P31371 208 aaPredicted RBP10.25□□□□□ -0.77
CDC27-209ENST00000532893 SNCAP37840 140 aa10.25□□□□□ -0.77
CDC27-209ENST00000532893 CBX5P45973 191 aa10.25□□□□□ -0.77
CDC27-209ENST00000532893 AQP4P55087 323 aa10.25□□□□□ -0.77
CDC27-209ENST00000532893 MLANAQ16655 118 aa10.25□□□□□ -0.77
CDC27-209ENST00000532893 NEU1Q99519 415 aa10.25□□□□□ -0.77
CDC27-209ENST00000532893 MRPL36Q9P0J6 103 aaKnown RBP10.25□□□□□ -0.77
CDC27-209ENST00000532893 DKK2Q9UBU2 259 aa10.25□□□□□ -0.77
CDC27-209ENST00000532893 TMEM189A5PLL7 270 aa10.24□□□□□ -0.77
CDC27-209ENST00000532893 EBAG9O00559 213 aa10.24□□□□□ -0.77
CDC27-209ENST00000532893 IGKV1-39P01597 117 aa10.24□□□□□ -0.77
CDC27-209ENST00000532893 IGKV1D-39P04432 117 aa10.24□□□□□ -0.77
CDC27-209ENST00000532893 KCTD21Q4G0X4 260 aa10.24□□□□□ -0.77
CDC27-209ENST00000532893 PHLDA2Q53GA4 152 aa10.24□□□□□ -0.77
CDC27-209ENST00000532893 FAM222AQ5U5X8 452 aa10.24□□□□□ -0.77
CDC27-209ENST00000532893 ZNF705AQ6ZN79 300 aaPredicted RBP10.24□□□□□ -0.77
CDC27-209ENST00000532893 NIPSNAP3BQ9BS92 247 aa10.24□□□□□ -0.77
CDC27-209ENST00000532893 IFT46Q9NQC8 304 aa10.24□□□□□ -0.77
CDC27-209ENST00000532893 DIABLOQ9NR28 239 aa10.24□□□□□ -0.77
CDC27-209ENST00000532893 APOBP04114 4563 aaKnown RBP10.24□□□□□ -0.77
CDC27-209ENST00000532893 A0A0A6YYH2 397 aa10.23□□□□□ -0.77
CDC27-209ENST00000532893 SMIM9A6NGZ8 99 aa10.23□□□□□ -0.77
CDC27-209ENST00000532893 A6NJ64 397 aa10.23□□□□□ -0.77
CDC27-209ENST00000532893 ZNF705FA8MVS1 300 aaPredicted RBP10.23□□□□□ -0.77
CDC27-209ENST00000532893 CLN5O75503 358 aa10.23□□□□□ -0.77
CDC27-209ENST00000532893 CLEC2LP0C7M8 214 aa10.23□□□□□ -0.77
CDC27-209ENST00000532893 ZNF705DP0CH99 300 aaPredicted RBP10.23□□□□□ -0.77
CDC27-209ENST00000532893 ZNF705BP0CI00 300 aaPredicted RBP10.23□□□□□ -0.77
CDC27-209ENST00000532893 SDC2P34741 201 aa10.23□□□□□ -0.77
CDC27-209ENST00000532893 EIF2B2P49770 351 aaKnown RBP10.23□□□□□ -0.77
CDC27-209ENST00000532893 FXYD7P58549 80 aa10.23□□□□□ -0.77
CDC27-209ENST00000532893 SNRPD3P62318 126 aaKnown RBP10.23□□□□□ -0.77
CDC27-209ENST00000532893 MXD1Q05195 221 aa10.23□□□□□ -0.77
CDC27-209ENST00000532893 IZUMO4Q1ZYL8 232 aa10.23□□□□□ -0.77
CDC27-209ENST00000532893 TMEM88Q6PEY1 159 aa10.23□□□□□ -0.77
CDC27-209ENST00000532893 FXYD6Q9H0Q3 95 aa10.23□□□□□ -0.77
CDC27-209ENST00000532893 FNDC4Q9H6D8 234 aaPredicted RBP10.23□□□□□ -0.77
CDC27-209ENST00000532893 RNF167Q9H6Y7 350 aa10.23□□□□□ -0.77
CDC27-209ENST00000532893 TMED3Q9Y3Q3 217 aa10.23□□□□□ -0.77
CDC27-209ENST00000532893 FAM90A26D6RGX4 464 aa10.22□□□□□ -0.77
CDC27-209ENST00000532893 IGKV1-17P01599 117 aa10.22□□□□□ -0.77
CDC27-209ENST00000532893 AP2S1P53680 142 aaPredicted RBP10.22□□□□□ -0.77
CDC27-209ENST00000532893 TIGITQ495A1 244 aa10.22□□□□□ -0.77
CDC27-209ENST00000532893 IDNKQ5T6J7 187 aa10.22□□□□□ -0.77
CDC27-209ENST00000532893 C16orf54Q6UWD8 224 aa10.22□□□□□ -0.77
CDC27-209ENST00000532893 OR6F1Q8NGZ6 308 aa10.22□□□□□ -0.77
CDC27-209ENST00000532893 MRGPRFQ96AM1 343 aa10.22□□□□□ -0.77
CDC27-209ENST00000532893 YTHDF1Q9BYJ9 559 aaKnown RBP10.22□□□□□ -0.77
CDC27-209ENST00000532893 FAM212BQ9NTI7 297 aaPredicted RBP10.22□□□□□ -0.77
CDC27-209ENST00000532893 RFNGQ9Y644 331 aa10.22□□□□□ -0.77
CDC27-209ENST00000532893 U3KQE9 123 aa10.22□□□□□ -0.77
CDC27-209ENST00000532893 DNAH5Q8TE73 4624 aa10.21□□□□□ -0.77
CDC27-209ENST00000532893 IGKV3-20P01619 116 aa10.21□□□□□ -0.77
CDC27-209ENST00000532893 SCAND1P57086 179 aa10.21□□□□□ -0.77
CDC27-209ENST00000532893 TBC1D26Q86UD7 250 aa10.21□□□□□ -0.77
CDC27-209ENST00000532893 C6orf223Q8N319 242 aa10.21□□□□□ -0.77
CDC27-209ENST00000532893 SLC35G3Q8N808 338 aa10.21□□□□□ -0.77
CDC27-209ENST00000532893 OR5H2Q8NGV7 314 aa10.21□□□□□ -0.77
CDC27-209ENST00000532893 OR4X1Q8NH49 305 aa10.21□□□□□ -0.77
CDC27-209ENST00000532893 GLMPQ8WWB7 406 aa10.21□□□□□ -0.77
CDC27-209ENST00000532893 SSR3Q9UNL2 185 aa10.21□□□□□ -0.77
CDC27-209ENST00000532893 NBDYA0A0U1RRE5 68 aa10.2□□□□□ -0.78
CDC27-209ENST00000532893 TEX48A0A1B0GUV7 120 aa10.2□□□□□ -0.78
CDC27-209ENST00000532893 HNRNPCP07910 306 aaKnown RBP eCLIP10.2□□□□□ -0.783e-6■□□□□ 10.8
CDC27-209ENST00000532893 RNASE2P10153 161 aaKnown RBP10.2□□□□□ -0.78
CDC27-209ENST00000532893 HLA-DRB4P13762 266 aa10.2□□□□□ -0.78
CDC27-209ENST00000532893 S100GP29377 79 aa10.2□□□□□ -0.78
CDC27-209ENST00000532893 OPRK1P41145 380 aa10.2□□□□□ -0.78
CDC27-209ENST00000532893 SUB1P53999 127 aaKnown RBP eCLIP10.2□□□□□ -0.78
CDC27-209ENST00000532893 FAM3BP58499 235 aaPredicted RBP10.2□□□□□ -0.78
CDC27-209ENST00000532893 NRG4Q8WWG1 115 aa10.2□□□□□ -0.78
CDC27-209ENST00000532893 ATG101Q9BSB4 218 aa10.2□□□□□ -0.78
CDC27-209ENST00000532893 HLA-DRB4X5D2U9 266 aa10.2□□□□□ -0.78
CDC27-209ENST00000532893 DMBT1Q9UGM3 2413 aaPredicted RBP10.19□□□□□ -0.78
CDC27-209ENST00000532893 CORTO00230 105 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 184.4 ms