RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 TRPM6Q9BX84 2022 aa2.15□□□□□ -2.06
USP47-211ENST00000531513 PRORSD1PA6NEY8 169 aa2.15□□□□□ -2.07
USP47-211ENST00000531513 H7C2G1 150 aa2.15□□□□□ -2.07
USP47-211ENST00000531513 CSRP1P21291 193 aaKnown RBP2.15□□□□□ -2.07
USP47-211ENST00000531513 RPS4Y1P22090 263 aaKnown RBP2.15□□□□□ -2.07
USP47-211ENST00000531513 CDC42P60953 191 aa2.15□□□□□ -2.07
USP47-211ENST00000531513 TMEM128Q5BJH2 165 aa2.15□□□□□ -2.07
USP47-211ENST00000531513 LYRM7Q5U5X0 104 aa2.15□□□□□ -2.07
USP47-211ENST00000531513 RPP25LQ8N5L8 163 aaKnown RBP2.15□□□□□ -2.07
USP47-211ENST00000531513 Q8NDZ9 215 aa2.15□□□□□ -2.07
USP47-211ENST00000531513 OR10J5Q8NHC4 309 aa2.15□□□□□ -2.07
USP47-211ENST00000531513 MAFIPQ8WZ33 124 aa2.15□□□□□ -2.07
USP47-211ENST00000531513 SERPINI1Q99574 410 aa2.15□□□□□ -2.07
USP47-211ENST00000531513 RNF122Q9H9V4 155 aa2.15□□□□□ -2.07
USP47-211ENST00000531513 SS18L2Q9UHA2 77 aa2.15□□□□□ -2.07
USP47-211ENST00000531513 TOPBP1Q92547 1522 aa2.15□□□□□ -2.07
USP47-211ENST00000531513 KIF13BQ9NQT8 1826 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 IGHV3-64A0A075B6Q5 118 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 TRAV41A0A0B4J266 112 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 FNDC10F2Z333 226 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 TRAPPC2LH3BP13 241 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 SLC22A1O15245 554 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 PPBPP02775 128 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 IGKV4-1P06312 121 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 DEFA4P12838 97 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 CASP1P29466 404 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 FUSP35637 526 aaKnown RBP eCLIP2.14□□□□□ -2.07
USP47-211ENST00000531513 ATP5G3P48201 142 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 HINT1P49773 126 aaPredicted RBP2.14□□□□□ -2.07
USP47-211ENST00000531513 ZNF80P51504 273 aaPredicted RBP2.14□□□□□ -2.07
USP47-211ENST00000531513 KISS1Q15726 138 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 SAMD13Q5VXD3 122 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 LCA10Q71F78 164 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 CLVS1Q8IUQ0 354 aaPredicted RBP2.14□□□□□ -2.07
USP47-211ENST00000531513 NUP35Q8NFH5 326 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 OR13D1Q8NGV5 346 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 TERB2Q8NHR7 220 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 PLEKHB2Q96CS7 222 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 DNAJC30Q96LL9 226 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 SCGB3A1Q96QR1 104 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 LYSMD1Q96S90 227 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 SLC39A9Q9NUM3 307 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 NDUFB11Q9NX14 153 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 ERGIC3Q9Y282 383 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 FMN1Q68DA7 1419 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 KIF1BO60333 1816 aa2.14□□□□□ -2.07
USP47-211ENST00000531513 IGHV1-18A0A0C4DH31 117 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 RIIAD1A6NNX1 92 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 CLDN25C9JDP6 229 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 C3orf84H3BNL1 204 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 KPNA4O00629 521 aaPredicted RBP2.13□□□□□ -2.07
USP47-211ENST00000531513 NFYAP23511 347 aaPredicted RBP2.13□□□□□ -2.07
USP47-211ENST00000531513 PIGPP57054 158 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 SUPT4H1P63272 117 aaKnown RBP2.13□□□□□ -2.07
USP47-211ENST00000531513 RHEBQ15382 184 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 FAM27BQ5VT28 67 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 BRD3OSQ6XYD6 125 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 MIR17HGQ75NE6 70 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 BPIFA4PQ86YQ2 179 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 GRPEL2Q8TAA5 225 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 DNAJC9Q8WXX5 260 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 C11orf40Q8WZ69 217 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 CCDC32Q9BV29 185 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 LRTM1Q9HBL6 345 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 MED29Q9NX70 200 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 PRO2289Q9P1D8 64 aa2.13□□□□□ -2.07
USP47-211ENST00000531513 TRBV10-2A0A0K0K1G8 114 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 A0A1W2PRE2 83 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 ARL5CA6NH57 179 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 RFPL4AA6NLU0 287 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 RFPL4AL1F8VTS6 287 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 C19orf84I3L1E1 186 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 M0QZK8 103 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 GADD45GO95257 159 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 FAM107AO95990 144 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 OR10J4P0C629 311 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 S100A4P26447 101 aaKnown RBP2.12□□□□□ -2.07
USP47-211ENST00000531513 GLRXP35754 106 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 EIF2B2P49770 351 aaKnown RBP2.12□□□□□ -2.07
USP47-211ENST00000531513 YPEL3P61236 119 aaPredicted RBP2.12□□□□□ -2.07
USP47-211ENST00000531513 ERHP84090 104 aaKnown RBP2.12□□□□□ -2.07
USP47-211ENST00000531513 OR4X2Q8NGF9 303 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 OR9Q1Q8NGQ5 310 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 PFN4Q8NHR9 129 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 MBD3L1Q8WWY6 194 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 LZICQ8WZA0 190 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 BORCS5Q969J3 196 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 HSPB9Q9BQS6 159 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 AMMECR1Q9Y4X0 333 aaPredicted RBP2.12□□□□□ -2.07
USP47-211ENST00000531513 ADAMTS7Q9UKP4 1686 aa2.12□□□□□ -2.07
USP47-211ENST00000531513 SETD5Q9C0A6 1442 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 TMSB15BA0A087X1C1 80 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 DUXBA0A1W2PPF3 345 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 SRIP30626 198 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 TMEM258P61165 79 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 SURF2Q15527 256 aaPredicted RBP2.11□□□□□ -2.07
USP47-211ENST00000531513 ZNF791Q3KP31 576 aaPredicted RBP2.11□□□□□ -2.07
USP47-211ENST00000531513 LINC01554Q52M75 96 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 KTN1-AS1Q86SY8 53 aa2.11□□□□□ -2.07
USP47-211ENST00000531513 TRAPPC6BQ86SZ2 158 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms