RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 OR2W1Q9Y3N9 320 aa5.71□□□□□ -1.5
CD44-232ENST00000531118 TNXBP22105 4242 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 LOC102723971A0A1B0GUV8 181 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 A0A1W2PPQ1 181 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 HELTA6NFD8 242 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 SLC17A2O00624 439 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 NFYAP23511 347 aaPredicted RBP5.7□□□□□ -1.5
CD44-232ENST00000531118 P2RY1P47900 373 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 MFAP4P55083 255 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 LINC00315P59091 139 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 TAS2R31P59538 309 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 ERVFC1-1P60608 527 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 KCTD21Q4G0X4 260 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 Q6ZS49 121 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 SSX7Q7RTT5 188 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 SPAG16Q8N0X2 631 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 MS4A15Q8N5U1 240 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 NANOGP1Q8N7R0 232 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 GFI1Q99684 422 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 KRTAP3-1Q9BYR8 98 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 DCSTAMPQ9H295 470 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 Q9H8V8 135 aa5.7□□□□□ -1.5
CD44-232ENST00000531118 H3BMM0 161 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 I3L2K1 104 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 RBFOX2O43251 390 aaKnown RBP eCLIP5.69□□□□□ -1.5
CD44-232ENST00000531118 TNFSF12O43508 249 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 GNG7O60262 68 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 CD37P11049 281 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 HLA-DRB4P13762 266 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 NQO2P16083 231 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 RANBP1P43487 201 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 AQP4P55087 323 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 DHRS2Q13268 280 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 SPHARQ15513 63 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 USF2Q15853 346 aaPredicted RBP5.69□□□□□ -1.5
CD44-232ENST00000531118 RAB11BQ15907 218 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 ACSM3Q53FZ2 586 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 ZNF600Q6ZNG1 722 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 OR1L8Q8NGR8 309 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 SLC25A46Q96AG3 418 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 RAB3CQ96E17 227 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 TXN2Q99757 166 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 AIFM2Q9BRQ8 373 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 HINT2Q9BX68 163 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 PLGRKTQ9HBL7 147 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 NDUFA4L2Q9NRX3 87 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 FKBP14Q9NWM8 211 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 ZNF586Q9NXT0 402 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 BLOC1S6Q9UL45 172 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 HLA-DRB4X5D2U9 266 aa5.69□□□□□ -1.5
CD44-232ENST00000531118 A0A075B6Q4 140 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 TEX50A0A1B0GTY4 177 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 A0A1B0GU03 582 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 A0A1W2PS18 150 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 RGS10O43665 173 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 MT-CO2P00403 227 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 IFNA5P01569 189 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 IGHV3-48P01763 117 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 HBE1P02100 147 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 DNAH10OSP0CZ25 163 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 HIST1H1DP16402 221 aaKnown RBP5.68□□□□□ -1.5
CD44-232ENST00000531118 CLDN12P56749 244 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 FXYD7P58549 80 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 CLINT1Q14677 625 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 TRAM1Q15629 374 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 HSD17B12Q53GQ0 312 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 IZUMO2Q6UXV1 221 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 DMBX1Q8NFW5 382 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 OR1P1Q8NH06 330 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 NRG4Q8WWG1 115 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 UFD1Q92890 307 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 UPK3BQ9BT76 320 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 CENPOQ9BU64 300 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 CCDC90BQ9GZT6 254 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 Q9H521 79 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 COMMD9Q9P000 198 aa5.68□□□□□ -1.5
CD44-232ENST00000531118 TMEM272A0A1B0GTI8 110 aa5.67□□□□□ -1.5
CD44-232ENST00000531118 FAM90A26D6RGX4 464 aa5.67□□□□□ -1.5
CD44-232ENST00000531118 F5H768 121 aa5.67□□□□□ -1.5
CD44-232ENST00000531118 DENRO43583 198 aaKnown RBP5.67□□□□□ -1.5
CD44-232ENST00000531118 HPRT1P00492 218 aa5.67□□□□□ -1.5
CD44-232ENST00000531118 DTYMKP23919 212 aa5.67□□□□□ -1.5
CD44-232ENST00000531118 PSMA1P25786 263 aaKnown RBP5.67□□□□□ -1.5
CD44-232ENST00000531118 CATR1Q13166 79 aa5.67□□□□□ -1.5
CD44-232ENST00000531118 TMEM69Q5SWH9 247 aa5.67□□□□□ -1.5
CD44-232ENST00000531118 LAIR2Q6ISS4 152 aa5.67□□□□□ -1.5
CD44-232ENST00000531118 ZNF709Q8N972 641 aa5.67□□□□□ -1.5
CD44-232ENST00000531118 METTL26Q96S19 204 aa5.67□□□□□ -1.5
CD44-232ENST00000531118 RAB26Q9ULW5 256 aa5.67□□□□□ -1.5
CD44-232ENST00000531118 MARCH11A6NNE9 402 aa5.66□□□□□ -1.5
CD44-232ENST00000531118 SULT1C2O00338 296 aa5.66□□□□□ -1.5
CD44-232ENST00000531118 ARL6IP5O75915 188 aa5.66□□□□□ -1.5
CD44-232ENST00000531118 ATP6V1G2O95670 118 aa5.66□□□□□ -1.5
CD44-232ENST00000531118 UCHL1P09936 223 aa5.66□□□□□ -1.5
CD44-232ENST00000531118 HSMCR30P0CW71 290 aa5.66□□□□□ -1.5
CD44-232ENST00000531118 NPPCP23582 126 aa5.66□□□□□ -1.5
CD44-232ENST00000531118 GADD45AP24522 165 aa5.66□□□□□ -1.5
CD44-232ENST00000531118 CRYBB3P26998 211 aa5.66□□□□□ -1.5
CD44-232ENST00000531118 TALDO1P37837 337 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms