RNA–Protein interactions for RNA: ENST00000530277.5

SCN3B-206, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 3,984 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-206ENST00000530277 OR8B3Q8NGG8 313 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 OR8B2Q96RD0 313 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 HIST1H2BLQ99880 126 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 AAMDCQ9H7C9 122 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 WDR83OSQ9Y284 106 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 HIVEP3Q5T1R4 2406 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 ARHGAP32A7KAX9 2087 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 C15orf62A8K5M9 175 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 C17orf100A8MU93 164 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 TMEM183BQ1AE95 376 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 KLF17Q5JT82 389 aaPredicted RBP10.2□□□□□ -0.78
SCN3B-206ENST00000530277 GOLT1AQ6ZVE7 132 aa10.2□□□□□ -0.78
SCN3B-206ENST00000530277 EREGO14944 169 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 ZNF207O43670 478 aaKnown RBP10.19□□□□□ -0.78
SCN3B-206ENST00000530277 AARDQ4LEZ3 155 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 ST6GALNAC6Q969X2 333 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 GP6Q9HCN6 339 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 MUC22E2RYF6 1773 aaPredicted RBP10.19□□□□□ -0.78
SCN3B-206ENST00000530277 ORM1P02763 201 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 ZNF134P52741 427 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 TMEM177Q53S58 311 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 RNF138Q8WVD3 245 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 RAB1BQ9H0U4 201 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 ZNF430Q9H8G1 570 aaPredicted RBP10.19□□□□□ -0.78
SCN3B-206ENST00000530277 SLC25A15Q9Y619 301 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 FA2HQ7L5A8 372 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 SSX8Q7RTT4 187 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 TMEM183AQ8IXX5 376 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 PERPQ96FX8 193 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 MGST2Q99735 147 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 POLQO75417 2590 aa10.19□□□□□ -0.78
SCN3B-206ENST00000530277 DLL1O00548 723 aa10.18□□□□□ -0.78
SCN3B-206ENST00000530277 LYPD2Q6UXB3 125 aa10.18□□□□□ -0.78
SCN3B-206ENST00000530277 SFXN3Q9BWM7 321 aa10.18□□□□□ -0.78
SCN3B-206ENST00000530277 IFI27L2Q9H2X8 130 aa10.18□□□□□ -0.78
SCN3B-206ENST00000530277 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.18□□□□□ -0.78
SCN3B-206ENST00000530277 BMPR1BO00238 502 aa10.18□□□□□ -0.78
SCN3B-206ENST00000530277 MBD3L1Q8WWY6 194 aa10.18□□□□□ -0.78
SCN3B-206ENST00000530277 PMCHL2Q9BQD1 86 aa10.18□□□□□ -0.78
SCN3B-206ENST00000530277 J3QW42 95 aa10.18□□□□□ -0.78
SCN3B-206ENST00000530277 SERF1AO75920 110 aa10.18□□□□□ -0.78
SCN3B-206ENST00000530277 TCTEX1D1Q8N7M0 179 aa10.18□□□□□ -0.78
SCN3B-206ENST00000530277 C15orf61A6NNL5 157 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 YPEL1O60688 119 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 OR5AL1P0C617 328 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 YPEL2Q96QA6 119 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 NAV2Q8IVL1 2488 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 SNAI2O43623 268 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 COL8A2P25067 703 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 BRS3P32247 399 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 CDKN1AP38936 164 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 HIST3H2BBQ8N257 126 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 OR4C5Q8NGB2 326 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 OR8A1Q8NGG7 326 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 SLC25A33Q9BSK2 321 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 PLSCR4Q9NRQ2 329 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 IGKV3-15P01624 115 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 RPLP1P05386 114 aaKnown RBP10.17□□□□□ -0.78
SCN3B-206ENST00000530277 ADMP35318 185 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 SRP14P37108 136 aaKnown RBP10.17□□□□□ -0.78
SCN3B-206ENST00000530277 TCF24Q7RTU0 167 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 MBNL3Q9NUK0 354 aaKnown RBP10.17□□□□□ -0.78
SCN3B-206ENST00000530277 UFC1Q9Y3C8 167 aa10.17□□□□□ -0.78
SCN3B-206ENST00000530277 GFRA3O60609 400 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 AMBPP02760 352 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 IL4P05112 153 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 HTN1P15515 57 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 CCKARP32238 428 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 HINT1P49773 126 aaPredicted RBP10.16□□□□□ -0.78
SCN3B-206ENST00000530277 LINC01551Q86U37 167 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 HIGD1AQ9Y241 93 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 SPTBN5Q9NRC6 3674 aaKnown RBP10.16□□□□□ -0.78
SCN3B-206ENST00000530277 NHLH1Q02575 133 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 ZNF114Q8NC26 417 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 C1orf162Q8NEQ5 155 aaPredicted RBP10.16□□□□□ -0.78
SCN3B-206ENST00000530277 SRSF12Q8WXF0 261 aaKnown RBP10.16□□□□□ -0.78
SCN3B-206ENST00000530277 AGMATQ9BSE5 352 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 A0A087WWC5 75 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 DIAPH2-AS1Q14236 149 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 WDR73Q6P4I2 378 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 C5orf17Q8NAS9 161 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 FAM57AQ8TBR7 257 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 ZNF596Q8TC21 504 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 YTHDF2Q9Y5A9 579 aaKnown RBP10.16□□□□□ -0.78
SCN3B-206ENST00000530277 AMY1AP04745 511 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 WFDC3Q8IUB2 231 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 LINC00527Q9UJ94 153 aa10.16□□□□□ -0.78
SCN3B-206ENST00000530277 FOXA2Q9Y261 457 aaPredicted RBP10.16□□□□□ -0.78
SCN3B-206ENST00000530277 C19orf67A6NJJ6 358 aa10.15□□□□□ -0.78
SCN3B-206ENST00000530277 NBEAP1P0C6P0 100 aa10.15□□□□□ -0.78
SCN3B-206ENST00000530277 GZMBP10144 247 aa10.15□□□□□ -0.78
SCN3B-206ENST00000530277 S100A4P26447 101 aaKnown RBP10.15□□□□□ -0.78
SCN3B-206ENST00000530277 RELBQ01201 579 aa10.15□□□□□ -0.78
SCN3B-206ENST00000530277 OR5R1Q8NH85 324 aa10.15□□□□□ -0.78
SCN3B-206ENST00000530277 CENPEQ02224 2701 aa10.15□□□□□ -0.78
SCN3B-206ENST00000530277 TRAV8-1A0A0A6YYK1 113 aa10.15□□□□□ -0.78
SCN3B-206ENST00000530277 TEX50A0A1B0GTY4 177 aa10.15□□□□□ -0.78
SCN3B-206ENST00000530277 UPK2O00526 184 aa10.15□□□□□ -0.78
SCN3B-206ENST00000530277 WNT2P09544 360 aa10.15□□□□□ -0.78
SCN3B-206ENST00000530277 HIST1H1EP10412 219 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms