RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 TUBA4BQ9H853 241 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 TMEM138Q9NPI0 162 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 MED11Q9P086 117 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 MCTS1Q9ULC4 181 aaKnown RBP2.24□□□□□ -2.05
C11orf88-204ENST00000529661 ASB4Q9Y574 426 aa2.24□□□□□ -2.05
C11orf88-204ENST00000529661 A0A087WX48 190 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 BORCS7-ASMTA0A0B4J1R7 106 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 A0A1B0GX51 115 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 C19orf71A6NCJ1 209 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 BUB1B-PAK6H3BSN5 160 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 UBFD1O14562 309 aaKnown RBP2.23□□□□□ -2.05
C11orf88-204ENST00000529661 OGNP20774 298 aaKnown RBP2.23□□□□□ -2.05
C11orf88-204ENST00000529661 CD24P25063 80 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 SRIP30626 198 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 LPAR6P43657 344 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 ZNF141Q15928 474 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 RRN3P1Q2M238 152 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 CCDC58Q4VC31 144 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 SPANXN3Q5MJ09 141 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 OR10P1Q8NGE3 313 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 OR4D11Q8NGI4 311 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 CMTM2Q8TAZ6 248 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 OR2J1Q9GZK6 312 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 C16orf95Q9H693 158 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 NUBP2Q9Y5Y2 271 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 FANCMQ8IYD8 2048 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 SLX4Q8IY92 1834 aa2.23□□□□□ -2.05
C11orf88-204ENST00000529661 ERCC6Q03468 1493 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 CAMSAP2Q08AD1 1489 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 SCN9AQ15858 1988 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 IGHV3-15A0A0B4J1V0 119 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 IRGMA1A4Y4 181 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 FABP5P3A8MUU1 101 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 TRAPPC2LH3BP13 241 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 DEGS1O15121 323 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 SYNGR2O43760 224 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 CCL5P13501 91 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 POLR2HP52434 150 aaKnown RBP2.22□□□□□ -2.05
C11orf88-204ENST00000529661 TAF9Q16594 264 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 MIAQ16674 131 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 LGALSLQ3ZCW2 172 aaPredicted RBP2.22□□□□□ -2.05
C11orf88-204ENST00000529661 CCDC153Q494R4 210 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 PYDC2Q56P42 97 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 BRMS1LQ5PSV4 323 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.22□□□□□ -2.05
C11orf88-204ENST00000529661 OR51T1Q8NGJ9 327 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 OR5C1Q8NGR4 320 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 SLAMF6Q96DU3 332 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 PKMYT1Q99640 499 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 TTTY13Q9BZ97 58 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 TMEM133Q9H2Q1 129 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 PCTPQ9UKL6 214 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 LAMTOR2Q9Y2Q5 125 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 TECPR2O15040 1411 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 TRIOBPQ9H2D6 2365 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 FER1L6Q2WGJ9 1857 aa2.22□□□□□ -2.05
C11orf88-204ENST00000529661 LOC102725191A0A1B0GVB3 256 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 C17orf98A8MV24 154 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 J3KT08 172 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 BCL9O00512 1426 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 CDS2O95674 445 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 RPS3P23396 243 aaKnown RBP eCLIP2.21□□□□□ -2.06
C11orf88-204ENST00000529661 S100A4P26447 101 aaKnown RBP2.21□□□□□ -2.06
C11orf88-204ENST00000529661 CCR2P41597 374 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 AKR1C3P42330 323 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 XCL1P47992 114 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 YPEL3P61236 119 aaPredicted RBP2.21□□□□□ -2.06
C11orf88-204ENST00000529661 PSG9Q00887 426 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 MEF2BQ02080 365 aaPredicted RBP2.21□□□□□ -2.06
C11orf88-204ENST00000529661 ZNF117Q03924 483 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 SMIM21Q3B7S5 101 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 LINC01554Q52M75 96 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 MALRD1Q5VYJ5 2156 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 AGTRAPQ6RW13 159 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 OR5A1Q8NGJ0 315 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 CANT1Q8WVQ1 401 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 ISOC1Q96CN7 298 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 WDR90Q96KV7 1748 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 GPX7Q96SL4 187 aaPredicted RBP2.21□□□□□ -2.06
C11orf88-204ENST00000529661 MIEN1Q9BRT3 115 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 TMEM126AQ9H061 195 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 SLC39A9Q9NUM3 307 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 HEY1Q9Y5J3 304 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 TOPBP1Q92547 1522 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 ANAPC1Q9H1A4 1944 aa2.21□□□□□ -2.06
C11orf88-204ENST00000529661 NCAPD3P42695 1498 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 SHANK3Q9BYB0 1731 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 SHROOM3Q8TF72 1996 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 CD109Q6YHK3 1445 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 TRAV36DV7A0A075B6V5 113 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 TMEM235A6NFC5 223 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 TLCD2A6NGC4 264 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 GGT3PA6NGU5 568 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 ZNF860A6NHJ4 632 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 TAX1BP3O14907 124 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 CYB5BO43169 146 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 PSCAO43653 123 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 IGHV3-7P01780 117 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 IGKV4-1P06312 121 aa2.2□□□□□ -2.06
C11orf88-204ENST00000529661 DBIP07108 87 aaKnown RBP2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms