RNA–Protein interactions for RNA: ENST00000529002.2

SSRP1-204, Transcript of structure specific recognition protein 1, humanhuman

TSL 5

Gene SSRP1, Length 648 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-204ENST00000529002 C1QTNF4Q9BXJ3 329 aa13.4□□□□□ -0.26
SSRP1-204ENST00000529002 NBDYA0A0U1RRE5 68 aa13.39□□□□□ -0.27
SSRP1-204ENST00000529002 IGKV3-20P01619 116 aa13.39□□□□□ -0.27
SSRP1-204ENST00000529002 CADM3Q8N126 398 aa13.39□□□□□ -0.27
SSRP1-204ENST00000529002 OR5AP2Q8NGF4 316 aa13.39□□□□□ -0.27
SSRP1-204ENST00000529002 SLC25A38Q96DW6 304 aa13.39□□□□□ -0.27
SSRP1-204ENST00000529002 NEU1Q99519 415 aa13.39□□□□□ -0.27
SSRP1-204ENST00000529002 NDUFB11Q9NX14 153 aa13.39□□□□□ -0.27
SSRP1-204ENST00000529002 TMED3Q9Y3Q3 217 aa13.39□□□□□ -0.27
SSRP1-204ENST00000529002 SCGNO76038 276 aa13.38□□□□□ -0.27
SSRP1-204ENST00000529002 IGKV1-39P01597 117 aa13.38□□□□□ -0.27
SSRP1-204ENST00000529002 IGKV1D-39P04432 117 aa13.38□□□□□ -0.27
SSRP1-204ENST00000529002 FGF9P31371 208 aaPredicted RBP13.38□□□□□ -0.27
SSRP1-204ENST00000529002 RFX2P48378 723 aa13.38□□□□□ -0.27
SSRP1-204ENST00000529002 KRTAP10-2P60368 255 aa13.38□□□□□ -0.27
SSRP1-204ENST00000529002 GDF5OSQ5U4N7 250 aa13.38□□□□□ -0.27
SSRP1-204ENST00000529002 PRSS48Q7RTY5 328 aa13.38□□□□□ -0.27
SSRP1-204ENST00000529002 OR4A16Q8NH70 328 aa13.38□□□□□ -0.27
SSRP1-204ENST00000529002 ZNF2Q9BSG1 426 aaPredicted RBP13.38□□□□□ -0.27
SSRP1-204ENST00000529002 FXYD6Q9H0Q3 95 aa13.38□□□□□ -0.27
SSRP1-204ENST00000529002 EHFQ9NZC4 300 aa13.38□□□□□ -0.27
SSRP1-204ENST00000529002 RRP15Q9Y3B9 282 aaKnown RBP13.38□□□□□ -0.27
SSRP1-204ENST00000529002 NUTF2P61970 127 aaKnown RBP13.37□□□□□ -0.27
SSRP1-204ENST00000529002 TIGITQ495A1 244 aa13.37□□□□□ -0.27
SSRP1-204ENST00000529002 TMEM230Q96A57 120 aa13.37□□□□□ -0.27
SSRP1-204ENST00000529002 SEC22AQ96IW7 307 aa13.37□□□□□ -0.27
SSRP1-204ENST00000529002 TSC22D3Q99576 134 aa13.37□□□□□ -0.27
SSRP1-204ENST00000529002 FNDC4Q9H6D8 234 aaPredicted RBP13.37□□□□□ -0.27
SSRP1-204ENST00000529002 RNF167Q9H6Y7 350 aa13.37□□□□□ -0.27
SSRP1-204ENST00000529002 RFNGQ9Y644 331 aa13.37□□□□□ -0.27
SSRP1-204ENST00000529002 FLG2Q5D862 2391 aaPredicted RBP13.36□□□□□ -0.27
SSRP1-204ENST00000529002 TMEM189A5PLL7 270 aa13.36□□□□□ -0.27
SSRP1-204ENST00000529002 FAM90A26D6RGX4 464 aa13.36□□□□□ -0.27
SSRP1-204ENST00000529002 HSPE1P61604 102 aaKnown RBP13.36□□□□□ -0.27
SSRP1-204ENST00000529002 ERHP84090 104 aaKnown RBP13.36□□□□□ -0.27
SSRP1-204ENST00000529002 PHLDA2Q53GA4 152 aa13.36□□□□□ -0.27
SSRP1-204ENST00000529002 GSG1LQ6UXU4 331 aa13.36□□□□□ -0.27
SSRP1-204ENST00000529002 ZNRF2Q8NHG8 242 aa13.36□□□□□ -0.27
SSRP1-204ENST00000529002 GLMPQ8WWB7 406 aa13.36□□□□□ -0.27
SSRP1-204ENST00000529002 ATG101Q9BSB4 218 aa13.36□□□□□ -0.27
SSRP1-204ENST00000529002 AUNIPQ9H7T9 357 aa13.36□□□□□ -0.27
SSRP1-204ENST00000529002 U3KQE9 123 aa13.36□□□□□ -0.27
SSRP1-204ENST00000529002 EPM2AB3EWF7 344 aa13.35□□□□□ -0.27
SSRP1-204ENST00000529002 PMP2P02689 132 aa13.35□□□□□ -0.27
SSRP1-204ENST00000529002 INAFM2P0DMQ5 153 aa13.35□□□□□ -0.27
SSRP1-204ENST00000529002 SFXN4Q6P4A7 337 aa13.35□□□□□ -0.27
SSRP1-204ENST00000529002 C16orf54Q6UWD8 224 aa13.35□□□□□ -0.27
SSRP1-204ENST00000529002 H2BFWTQ7Z2G1 175 aa13.35□□□□□ -0.27
SSRP1-204ENST00000529002 YTHDF2Q9Y5A9 579 aaKnown RBP13.35□□□□□ -0.27
SSRP1-204ENST00000529002 SMIM9A6NGZ8 99 aa13.34□□□□□ -0.27
SSRP1-204ENST00000529002 CLN5O75503 358 aa13.34□□□□□ -0.27
SSRP1-204ENST00000529002 IGKV1-17P01599 117 aa13.34□□□□□ -0.27
SSRP1-204ENST00000529002 CLEC2LP0C7M8 214 aa13.34□□□□□ -0.27
SSRP1-204ENST00000529002 HLA-DRB4P13762 266 aa13.34□□□□□ -0.27
SSRP1-204ENST00000529002 DHRS11Q6UWP2 260 aa13.34□□□□□ -0.27
SSRP1-204ENST00000529002 BORCS5Q969J3 196 aa13.34□□□□□ -0.27
SSRP1-204ENST00000529002 MRGPRFQ96AM1 343 aa13.34□□□□□ -0.27
SSRP1-204ENST00000529002 TXNL4BQ9NX01 149 aaKnown RBP13.34□□□□□ -0.27
SSRP1-204ENST00000529002 HLA-DRB4X5D2U9 266 aa13.34□□□□□ -0.27
SSRP1-204ENST00000529002 GPR31O00270 319 aa13.33□□□□□ -0.28
SSRP1-204ENST00000529002 RNASE2P10153 161 aaKnown RBP13.33□□□□□ -0.28
SSRP1-204ENST00000529002 TBCEQ15813 527 aaPredicted RBP13.33□□□□□ -0.28
SSRP1-204ENST00000529002 NARS2Q96I59 477 aaKnown RBP13.33□□□□□ -0.28
SSRP1-204ENST00000529002 SNCAP37840 140 aa13.32□□□□□ -0.28
SSRP1-204ENST00000529002 AQP4P55087 323 aa13.32□□□□□ -0.28
SSRP1-204ENST00000529002 FAM3BP58499 235 aaPredicted RBP13.32□□□□□ -0.28
SSRP1-204ENST00000529002 DAD1P61803 113 aa13.32□□□□□ -0.28
SSRP1-204ENST00000529002 SNRPD3P62318 126 aaKnown RBP13.32□□□□□ -0.28
SSRP1-204ENST00000529002 MXD1Q05195 221 aa13.32□□□□□ -0.28
SSRP1-204ENST00000529002 OXA1LQ15070 435 aa13.32□□□□□ -0.28
SSRP1-204ENST00000529002 KCTD21Q4G0X4 260 aa13.32□□□□□ -0.28
SSRP1-204ENST00000529002 CMTM1Q8IZ96 169 aa13.32□□□□□ -0.28
SSRP1-204ENST00000529002 LOC102723971A0A1B0GUV8 181 aa13.31□□□□□ -0.28
SSRP1-204ENST00000529002 TBC1D26Q86UD7 250 aa13.31□□□□□ -0.28
SSRP1-204ENST00000529002 C1orf158Q8N1D5 194 aa13.31□□□□□ -0.28
SSRP1-204ENST00000529002 ZNF709Q8N972 641 aa13.31□□□□□ -0.28
SSRP1-204ENST00000529002 OR4X1Q8NH49 305 aa13.31□□□□□ -0.28
SSRP1-204ENST00000529002 SLC35B3Q9H1N7 401 aa13.31□□□□□ -0.28
SSRP1-204ENST00000529002 IFT46Q9NQC8 304 aa13.31□□□□□ -0.28
SSRP1-204ENST00000529002 FAT1Q14517 4588 aa13.3□□□□□ -0.28
SSRP1-204ENST00000529002 TEX48A0A1B0GUV7 120 aa13.3□□□□□ -0.28
SSRP1-204ENST00000529002 PRM2P04554 102 aa13.3□□□□□ -0.28
SSRP1-204ENST00000529002 HNRNPCP07910 306 aaKnown RBP eCLIP13.3□□□□□ -0.28
SSRP1-204ENST00000529002 OPRK1P41145 380 aa13.3□□□□□ -0.28
SSRP1-204ENST00000529002 EIF2B2P49770 351 aaKnown RBP13.3□□□□□ -0.28
SSRP1-204ENST00000529002 C15orf53Q8NAA6 179 aa13.3□□□□□ -0.28
SSRP1-204ENST00000529002 RPS10-NUDT3A0A1W2PQS6 291 aa13.29□□□□□ -0.28
SSRP1-204ENST00000529002 NUDT3O95989 172 aa13.29□□□□□ -0.28
SSRP1-204ENST00000529002 SDC2P34741 201 aa13.29□□□□□ -0.28
SSRP1-204ENST00000529002 FUSP35637 526 aaKnown RBP eCLIP13.29□□□□□ -0.28
SSRP1-204ENST00000529002 ETV6P41212 452 aa13.29□□□□□ -0.28
SSRP1-204ENST00000529002 CBX5P45973 191 aa13.29□□□□□ -0.28
SSRP1-204ENST00000529002 USF2Q15853 346 aaPredicted RBP13.29□□□□□ -0.28
SSRP1-204ENST00000529002 IDNKQ5T6J7 187 aa13.29□□□□□ -0.28
SSRP1-204ENST00000529002 SLC35G3Q8N808 338 aa13.29□□□□□ -0.28
SSRP1-204ENST00000529002 KRTAP1-5Q9BYS1 174 aa13.29□□□□□ -0.28
SSRP1-204ENST00000529002 VCXQ9H320 206 aa13.29□□□□□ -0.28
SSRP1-204ENST00000529002 NRN1Q9NPD7 142 aa13.29□□□□□ -0.28
SSRP1-204ENST00000529002 LINC00588Q9Y4M8 146 aa13.29□□□□□ -0.28
SSRP1-204ENST00000529002 AP2S1P53680 142 aaPredicted RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms