RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 TNXAQ16473 311 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 MRGPRG-AS1Q2M3A8 158 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 TMEM183AQ8IXX5 376 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 ACY3Q96HD9 319 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 PARLQ9H300 379 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 SLC25A22Q9H936 323 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 SPTAN1Q13813 2472 aaKnown RBP13□□□□□ -0.33
SNRNP35-204ENST00000527158 ARHGAP32A7KAX9 2087 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 CGB1A6NKQ9 187 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 CD99P14209 185 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 GALR1P47211 349 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 WT1-ASQ06250 92 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 SRSF1Q07955 248 aaKnown RBP eCLIP13□□□□□ -0.33
SNRNP35-204ENST00000527158 PLGLAQ15195 96 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 SSX2Q16385 188 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 COA6Q5JTJ3 125 aaKnown RBP13□□□□□ -0.33
SNRNP35-204ENST00000527158 OR51G1Q8NGK1 321 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 OR4F5Q8NH21 305 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 C10orf105Q8TEF2 133 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 RAB24Q969Q5 203 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 OR4F4Q96R69 305 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 MGST2Q99735 147 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 GPR61Q9BZJ8 451 aa13□□□□□ -0.33
SNRNP35-204ENST00000527158 LSM4Q9Y4Z0 139 aaKnown RBP13□□□□□ -0.33
SNRNP35-204ENST00000527158 RPL27AP46776 148 aaKnown RBP12.99□□□□□ -0.33
SNRNP35-204ENST00000527158 CDC34P49427 236 aaPredicted RBP12.99□□□□□ -0.33
SNRNP35-204ENST00000527158 KCNIP4Q6PIL6 250 aa12.99□□□□□ -0.33
SNRNP35-204ENST00000527158 OR5R1Q8NH85 324 aa12.99□□□□□ -0.33
SNRNP35-204ENST00000527158 RNASEH2CQ8TDP1 164 aaKnown RBP12.99□□□□□ -0.33
SNRNP35-204ENST00000527158 CFHR4Q92496 578 aa12.99□□□□□ -0.33
SNRNP35-204ENST00000527158 ZNF462Q96JM2 2506 aa12.99□□□□□ -0.33
SNRNP35-204ENST00000527158 F6UZH7 168 aa12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 MOSP00540 346 aa12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 COMPP49747 757 aaPredicted RBP12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 CACNG8Q8WXS5 425 aa12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 RPUSD4Q96CM3 377 aaKnown RBP12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 GGTLC1Q9BX51 225 aa12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 FBXL15Q9H469 300 aa12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 POLR3KQ9Y2Y1 108 aaPredicted RBP12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 FLNCQ14315 2725 aa12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 USP9XQ93008 2570 aaPredicted RBP12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 TNCP24821 2201 aa12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 TYMSP04818 313 aa12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 GPX4P36969 197 aaPredicted RBP12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 UBE2E1P51965 193 aa12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 GNB1P62873 340 aa12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 MMDQ15546 238 aa12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 OR4X1Q8NH49 305 aa12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 IMMP2LQ96T52 175 aa12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 TBL2Q9Y4P3 447 aaKnown RBP12.98□□□□□ -0.33
SNRNP35-204ENST00000527158 A1L4Q6 167 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 DEFA6Q01524 100 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 CD69Q07108 199 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 HES1Q14469 280 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 TMEM144Q7Z5S9 345 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 PACRGQ96M98 296 aaPredicted RBP12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 TBX15Q96SF7 602 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 SSX3Q99909 188 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 LPAR2Q9HBW0 351 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 PXMP4Q9Y6I8 212 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 VWC2LB2RUY7 222 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 GGCTO75223 188 aaKnown RBP12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 FABP4P15090 132 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 PKIAP61925 76 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 OR2T10Q8NGZ9 312 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 PERPQ96FX8 193 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 MYO18BQ8IUG5 2567 aa12.97□□□□□ -0.33
SNRNP35-204ENST00000527158 IGHV4-61A0A0C4DH41 118 aa12.96□□□□□ -0.33
SNRNP35-204ENST00000527158 NBR2O15453 112 aa12.96□□□□□ -0.33
SNRNP35-204ENST00000527158 GAMTQ14353 236 aa12.96□□□□□ -0.33
SNRNP35-204ENST00000527158 MIC13Q5XKP0 118 aa12.96□□□□□ -0.33
SNRNP35-204ENST00000527158 C1orf159Q96HA4 380 aa12.96□□□□□ -0.33
SNRNP35-204ENST00000527158 EAF1Q96JC9 268 aaPredicted RBP12.96□□□□□ -0.33
SNRNP35-204ENST00000527158 AKAP6Q13023 2319 aa12.96□□□□□ -0.34
SNRNP35-204ENST00000527158 COL12A1Q99715 3063 aa12.96□□□□□ -0.34
SNRNP35-204ENST00000527158 A0A1W2PPV4 95 aa12.96□□□□□ -0.34
SNRNP35-204ENST00000527158 IGLC7A0M8Q6 106 aa12.96□□□□□ -0.34
SNRNP35-204ENST00000527158 C11orf94C9JXX5 98 aa12.96□□□□□ -0.34
SNRNP35-204ENST00000527158 TSTD3H0UI37 97 aa12.96□□□□□ -0.34
SNRNP35-204ENST00000527158 PAGE4O60829 102 aa12.96□□□□□ -0.34
SNRNP35-204ENST00000527158 RPL29P47914 159 aaKnown RBP12.96□□□□□ -0.34
SNRNP35-204ENST00000527158 NPBQ8NG41 125 aa12.96□□□□□ -0.34
SNRNP35-204ENST00000527158 OR1P1Q8NH06 330 aa12.96□□□□□ -0.34
SNRNP35-204ENST00000527158 SSMEM1Q8WWF3 244 aa12.96□□□□□ -0.34
SNRNP35-204ENST00000527158 SLC35E1Q96K37 410 aa12.96□□□□□ -0.34
SNRNP35-204ENST00000527158 HIST1H2BLQ99880 126 aa12.96□□□□□ -0.34
SNRNP35-204ENST00000527158 REG1AP05451 166 aa12.95□□□□□ -0.34
SNRNP35-204ENST00000527158 CD24P25063 80 aa12.95□□□□□ -0.34
SNRNP35-204ENST00000527158 DSCR9P59020 149 aa12.95□□□□□ -0.34
SNRNP35-204ENST00000527158 GFI1BQ5VTD9 330 aa12.95□□□□□ -0.34
SNRNP35-204ENST00000527158 PRDM13Q9H4Q3 707 aa12.95□□□□□ -0.34
SNRNP35-204ENST00000527158 EPG5Q9HCE0 2579 aa12.95□□□□□ -0.34
SNRNP35-204ENST00000527158 HMGB3O15347 200 aaKnown RBP12.94□□□□□ -0.34
SNRNP35-204ENST00000527158 CNIH1O95406 144 aa12.94□□□□□ -0.34
SNRNP35-204ENST00000527158 MLANAQ16655 118 aa12.94□□□□□ -0.34
SNRNP35-204ENST00000527158 DYNAPQ8N1N2 210 aa12.94□□□□□ -0.34
SNRNP35-204ENST00000527158 IGHV4-30-2A0A087WSY4 118 aa12.94□□□□□ -0.34
SNRNP35-204ENST00000527158 FCN1O00602 326 aa12.94□□□□□ -0.34
SNRNP35-204ENST00000527158 NDUFA3O95167 84 aa12.94□□□□□ -0.34
SNRNP35-204ENST00000527158 JOSD1Q15040 202 aaPredicted RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms