RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 PLXNB2O15031 1838 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 MYH11P35749 1972 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 TRIP12Q14669 1992 aaPredicted RBP3.24□□□□□ -1.89
CD44-213ENST00000525209 IZUMO1RA6ND01 250 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 ARRDC5A6NEK1 342 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 GABARAPH6UMI1 98 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 J3QR89 54 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 M0R143 59 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 SERF1AO75920 110 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 HLA-DQB1P01920 261 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 COPZ1P61923 177 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 RTL8BQ17RB0 113 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 CCSMST1Q4G0I0 132 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 GUSBP11Q6P575 273 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 SLC25A29Q8N8R3 303 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 OR4K5Q8NGD3 323 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 RAB2BQ8WUD1 216 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 SFT2D1Q8WV19 159 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 CMBLQ96DG6 245 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 TEX37Q96LM6 180 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 PEBP4Q96S96 227 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 NRTNQ99748 197 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 PRO3102Q9H379 93 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 HEXA-AS1Q9H8Q6 139 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 FGF22Q9HCT0 170 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 MRPS16Q9Y3D3 137 aaKnown RBP3.24□□□□□ -1.89
CD44-213ENST00000525209 GON4LQ3T8J9 2241 aa3.24□□□□□ -1.89
CD44-213ENST00000525209 DOCK7Q96N67 2140 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 COL3A1P02461 1466 aaPredicted RBP3.23□□□□□ -1.89
CD44-213ENST00000525209 PTPRFP10586 1907 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 MYH8P13535 1937 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 TRAV41A0A0B4J266 112 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 LOC107984640A0A0U1RRK4 108 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 TLCD2A6NGC4 264 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 KRTAP16-1A8MUX0 517 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 IGLL5B9A064 214 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 RBFOX2O43251 390 aaKnown RBP eCLIP3.23□□□□□ -1.89
CD44-213ENST00000525209 LY6G6DO95868 133 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 IGKV1-39P01597 117 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 TRGC2P03986 189 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 IGKV1D-39P04432 117 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 GPX1P07203 203 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 DPTQ07507 201 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 VMA21Q3ZAQ7 101 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 MPV17L2Q567V2 206 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 LDLRAD2Q5SZI1 272 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 AMMECR1LQ6DCA0 310 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 GLIPR1L1Q6UWM5 242 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 ZDHHC22Q8N966 263 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 ZNF709Q8N972 641 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 OR11G2Q8NGC1 345 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 OR51A4Q8NGJ6 313 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 RPS4Y2Q8TD47 263 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 NUP210Q8TEM1 1887 aaPredicted RBP3.23□□□□□ -1.89
CD44-213ENST00000525209 LYZL4Q96KX0 146 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 TMEM204Q9BSN7 226 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 CHAC1Q9BUX1 264 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 OTORQ9NRC9 128 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 SCN3BQ9NY72 215 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 CACNG5Q9UF02 275 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 NAT8Q9UHE5 227 aa3.23□□□□□ -1.89
CD44-213ENST00000525209 SCN5AQ14524 2016 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 TRIP11Q15643 1979 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 PHIPQ8WWQ0 1821 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 IGLV7-46A0A075B6I9 117 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 IGHV3-72A0A0B4J1Y9 119 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 IGKV1-6A0A0C4DH72 117 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 CCL25O15444 150 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 AMBPP02760 352 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 APODP05090 189 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 SEC11BP0C7V7 166 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 INAFM2P0DMQ5 153 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 LINC00694P0DN24 101 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 ZNF823P16415 610 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 RBMXP38159 391 aaKnown RBP3.22□□□□□ -1.89
CD44-213ENST00000525209 EIF2B2P49770 351 aaKnown RBP3.22□□□□□ -1.89
CD44-213ENST00000525209 INSL3P51460 131 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 PDGFRLQ15198 375 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 TMEM183BQ1AE95 376 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 LAIR2Q6ISS4 152 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 SLC25A34Q6PIV7 304 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 TMEM14EPQ6UXP3 125 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 LCA10Q71F78 164 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 PDPNQ86YL7 162 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 GPHB5Q86YW7 130 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 SNX29P2Q8IUI4 249 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 TMEM183AQ8IXX5 376 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 IFT20Q8IY31 132 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 ZNF799Q96GE5 643 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 AP1S3Q96PC3 154 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 DERL3Q96Q80 235 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 CAMK2N2Q96S95 79 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 MGLLQ99685 303 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 NKX6-2Q9C056 277 aaPredicted RBP3.22□□□□□ -1.89
CD44-213ENST00000525209 FGF23Q9GZV9 251 aaPredicted RBP3.22□□□□□ -1.89
CD44-213ENST00000525209 COX11Q9Y6N1 276 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 MYH1P12882 1939 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 LAMB1P07942 1786 aa3.22□□□□□ -1.89
CD44-213ENST00000525209 MYH7P12883 1935 aa3.21□□□□□ -1.9
CD44-213ENST00000525209 HTTP42858 3142 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms