RNA–Protein interactions for RNA: ENST00000524926.5

BEST1-204, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 2,404 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-204ENST00000524926 C10orf105Q8TEF2 133 aa12.17□□□□□ -0.46
BEST1-204ENST00000524926 FAM103A1Q9BTL3 118 aaKnown RBP12.17□□□□□ -0.46
BEST1-204ENST00000524926 TUBA4BQ9H853 241 aa12.17□□□□□ -0.46
BEST1-204ENST00000524926 SDF2L1Q9HCN8 221 aa12.17□□□□□ -0.46
BEST1-204ENST00000524926 TBL2Q9Y4P3 447 aaKnown RBP12.17□□□□□ -0.46
BEST1-204ENST00000524926 TCRBV4S1A1TA0A5B7 111 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 OR2C1O95371 312 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 PNRC1Q12796 327 aaPredicted RBP12.16□□□□□ -0.46
BEST1-204ENST00000524926 C5orf64Q2M2E5 130 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 RUSC1-AS1Q66K80 236 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 PVRIGQ6DKI7 326 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 TMEM37Q8WXS4 190 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 C22orf15Q8WYQ4 148 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 MALSU1Q96EH3 234 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 PERPQ96FX8 193 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 C19orf24Q9BVV8 132 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 PARLQ9H300 379 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 IGKV1D-37A0A075B6S9 117 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 FAM24BQ8N5W8 94 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 OR51G1Q8NGK1 321 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 WNT10AQ9GZT5 417 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 DOK5Q9P104 306 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 SPG11Q96JI7 2443 aa12.16□□□□□ -0.46
BEST1-204ENST00000524926 CSMD1Q96PZ7 3565 aa12.15□□□□□ -0.46
BEST1-204ENST00000524926 PDE6DO43924 150 aa12.15□□□□□ -0.46
BEST1-204ENST00000524926 CRYGCP07315 174 aa12.15□□□□□ -0.46
BEST1-204ENST00000524926 TMEM11P17152 192 aa12.15□□□□□ -0.46
BEST1-204ENST00000524926 SAA4P35542 130 aa12.15□□□□□ -0.46
BEST1-204ENST00000524926 TMEM241Q24JQ0 296 aa12.15□□□□□ -0.46
BEST1-204ENST00000524926 THAP8Q8NA92 274 aa12.15□□□□□ -0.46
BEST1-204ENST00000524926 NRGNQ92686 78 aa12.15□□□□□ -0.46
BEST1-204ENST00000524926 TECRQ9NZ01 308 aaKnown RBP12.15□□□□□ -0.46
BEST1-204ENST00000524926 NAT8Q9UHE5 227 aa12.15□□□□□ -0.46
BEST1-204ENST00000524926 CRYBG3Q68DQ2 2970 aa12.15□□□□□ -0.46
BEST1-204ENST00000524926 A1L4Q6 167 aa12.15□□□□□ -0.47
BEST1-204ENST00000524926 NDUFS8O00217 210 aa12.15□□□□□ -0.47
BEST1-204ENST00000524926 SRSF8Q9BRL6 282 aaKnown RBP12.15□□□□□ -0.47
BEST1-204ENST00000524926 DNAJC4Q9NNZ3 241 aa12.15□□□□□ -0.47
BEST1-204ENST00000524926 TNFRSF19Q9NS68 423 aa12.15□□□□□ -0.47
BEST1-204ENST00000524926 DMRT1Q9Y5R6 373 aa12.15□□□□□ -0.47
BEST1-204ENST00000524926 UTP20O75691 2785 aaKnown RBP12.14□□□□□ -0.47
BEST1-204ENST00000524926 A0A087WWC5 75 aa12.14□□□□□ -0.47
BEST1-204ENST00000524926 B4DEV8 164 aa12.14□□□□□ -0.47
BEST1-204ENST00000524926 OR7C2O60412 319 aa12.14□□□□□ -0.47
BEST1-204ENST00000524926 CLN5O75503 358 aa12.14□□□□□ -0.47
BEST1-204ENST00000524926 OR5G3P0C626 314 aa12.14□□□□□ -0.47
BEST1-204ENST00000524926 FAM106CPP0CH98 169 aa12.14□□□□□ -0.47
BEST1-204ENST00000524926 OR4X1Q8NH49 305 aa12.14□□□□□ -0.47
BEST1-204ENST00000524926 MLXQ9UH92 298 aa12.14□□□□□ -0.47
BEST1-204ENST00000524926 IGHV4-30-2A0A087WSY4 118 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 COX7A2P2O60397 106 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 CRYBA1P05813 215 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 NPPCP23582 126 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 TAS2R45P59539 299 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 SELENOTP62341 195 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 SRSF1Q07955 248 aaKnown RBP eCLIP12.13□□□□□ -0.47
BEST1-204ENST00000524926 ADIRFQ15847 76 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 TMEM116Q8NCL8 245 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 HIST1H2BAQ96A08 127 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 POLR3KQ9Y2Y1 108 aaPredicted RBP12.13□□□□□ -0.47
BEST1-204ENST00000524926 NDUFS6O75380 124 aaKnown RBP12.13□□□□□ -0.47
BEST1-204ENST00000524926 COX6B1P14854 86 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 CTRB1P17538 263 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 EBI3Q14213 229 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 FAM120AOSQ5T036 256 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 CTRB2Q6GPI1 263 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 Q8N6K4 173 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 YTHDF2Q9Y5A9 579 aaKnown RBP12.13□□□□□ -0.47
BEST1-204ENST00000524926 ABCA1O95477 2261 aa12.13□□□□□ -0.47
BEST1-204ENST00000524926 PSMB11A5LHX3 300 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 VWC2LB2RUY7 222 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 NPFFO15130 113 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 NDUFB4O95168 129 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 MT-ND4LP03901 98 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 C8orf88P0DMB2 117 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 BRS3P32247 399 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 CX3CL1P78423 397 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 C10orf113Q5VZT2 155 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 ZNF562Q6V9R5 426 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 PQLC2Q6ZP29 291 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 OR1L4Q8NGR5 311 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 AJUBAQ96IF1 538 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 PFDN5Q99471 154 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 TXNDC17Q9BRA2 123 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 EPG5Q9HCE0 2579 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 CENPVL3A0A0U1RRI6 287 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 F6UZH7 168 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 OR10J4P0C629 311 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 PAX8Q06710 450 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 PIP4P2Q8N4L2 257 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 UHRF2Q96PU4 802 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 RNF2Q99496 336 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 MRPL32Q9BYC8 188 aaKnown RBP12.12□□□□□ -0.47
BEST1-204ENST00000524926 GSX1Q9H4S2 264 aaPredicted RBP12.12□□□□□ -0.47
BEST1-204ENST00000524926 TMEM167BQ9NRX6 74 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 URGCP-MRPS24S4R325 110 aa12.12□□□□□ -0.47
BEST1-204ENST00000524926 IGHV3OR16-10A0A075B7F0 116 aa12.11□□□□□ -0.47
BEST1-204ENST00000524926 TRAV5A0A0B4J249 113 aa12.11□□□□□ -0.47
BEST1-204ENST00000524926 ORM2P19652 201 aa12.11□□□□□ -0.47
BEST1-204ENST00000524926 BPIFB3P59826 476 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms