RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 PDCD10Q9BUL8 212 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 MS4A6AQ9H2W1 248 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 FKBP14Q9NWM8 211 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 DAPK2Q9UIK4 370 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 TBC1D24Q9ULP9 559 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 ETV7Q9Y603 341 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 HECTD4Q9Y4D8 3996 aa4.53□□□□□ -1.68
PABPC1-220ENST00000522658 IGLV2-18A0A075B6J9 118 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 IGHV3-66A0A0C4DH42 116 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 SMIM30A4D0T7 59 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 KRASP01116 189 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 NPPCP23582 126 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 SNRPD3P62318 126 aaKnown RBP4.52□□□□□ -1.69
PABPC1-220ENST00000522658 WT1-ASQ06250 92 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 POU2AF1Q16633 256 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 KLK9Q2XQG4 91 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 KCTD21Q4G0X4 260 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 UBE2UQ5VVX9 321 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 C22orf42Q6IC83 251 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 ZNF818PQ6ZRF7 136 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 PRSS48Q7RTY5 328 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 SLC35G3Q8N808 338 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 Q8NAQ8 132 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 OR1P1Q8NH06 330 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 TMEM230Q96A57 120 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 DGCR14Q96DF8 476 aaKnown RBP4.52□□□□□ -1.69
PABPC1-220ENST00000522658 TXN2Q99757 166 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 ATG101Q9BSB4 218 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 ENY2Q9NPA8 101 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 DIABLOQ9NR28 239 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 EHFQ9NZC4 300 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 KLK9Q9UKQ9 250 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 ELF5Q9UKW6 265 aaPredicted RBP4.52□□□□□ -1.69
PABPC1-220ENST00000522658 NSG2Q9Y328 171 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 TMED3Q9Y3Q3 217 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 HERC2O95714 4834 aa4.52□□□□□ -1.69
PABPC1-220ENST00000522658 TRAV3A0A0B4J244 114 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 TEX50A0A1B0GTY4 177 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 TMEM189A5PLL7 270 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 C16orf90A8MZG2 172 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 K7EIM0 57 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 CORTO00230 105 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 MT-CO2P00403 227 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 FCER2P06734 321 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 ZNF688P0C7X2 276 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 HTN3P15516 51 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 F2RP25116 425 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 G6PCP35575 357 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 SNCAP37840 140 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 HOXA1P49639 335 aaPredicted RBP4.51□□□□□ -1.69
PABPC1-220ENST00000522658 SUB1P53999 127 aaKnown RBP eCLIP4.51□□□□□ -1.69
PABPC1-220ENST00000522658 EMP1P54849 157 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 TBCEQ15813 527 aaPredicted RBP4.51□□□□□ -1.69
PABPC1-220ENST00000522658 LGALS9BQ3B8N2 356 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 ACTL10Q5JWF8 245 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 OGFRL1Q5TC84 451 aaPredicted RBP4.51□□□□□ -1.69
PABPC1-220ENST00000522658 C1orf134Q5TEV5 83 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 ZNF600Q6ZNG1 722 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 ZNF767PQ75MW2 155 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 H2BFWTQ7Z2G1 175 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 RNASE11Q8TAA1 199 aaKnown RBP4.51□□□□□ -1.69
PABPC1-220ENST00000522658 LGALS14Q8TCE9 139 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 OR10C1Q96KK4 312 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 NXF2Q9GZY0 626 aaKnown RBP4.51□□□□□ -1.69
PABPC1-220ENST00000522658 VCX3BQ9H321 246 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 RNF167Q9H6Y7 350 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 NDUFA4L2Q9NRX3 87 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 NDUFB11Q9NX14 153 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 RHBDL2Q9NX52 303 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 CLEC5AQ9NY25 188 aa4.51□□□□□ -1.69
PABPC1-220ENST00000522658 RRP15Q9Y3B9 282 aaKnown RBP4.51□□□□□ -1.69
PABPC1-220ENST00000522658 PUS1Q9Y606 427 aaKnown RBP eCLIP4.51□□□□□ -1.69
PABPC1-220ENST00000522658 TRAV18A0A075B6X5 111 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 IGHV3OR16-12A0A075B7B8 117 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 HELTA6NFD8 242 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 KNCNA6PVL3 124 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 GSTZ1O43708 216 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-220ENST00000522658 IGHV3-48P01763 117 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 CTSGP08311 255 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 SPART-AS1P0CW21 52 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 PSMB9P28065 219 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 FGF9P31371 208 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-220ENST00000522658 OPRK1P41145 380 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 LPAR6P43657 344 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 AKR1C2P52895 323 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 TAS2R46P59540 309 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 TSPAN5P62079 268 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 DHRS2Q13268 280 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 EIF4EBP1Q13541 118 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-220ENST00000522658 PSMG4Q5JS54 123 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 LAIR2Q6ISS4 152 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 SFXN4Q6P4A7 337 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 TRPT1Q86TN4 253 aaKnown RBP4.5□□□□□ -1.69
PABPC1-220ENST00000522658 HOGA1Q86XE5 327 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 OR5AP2Q8NGF4 316 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 OR5H2Q8NGV7 314 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 ZNF414Q96IQ9 312 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 ZNF2Q9BSG1 426 aaPredicted RBP4.5□□□□□ -1.69
PABPC1-220ENST00000522658 KRTAP1-5Q9BYS1 174 aa4.5□□□□□ -1.69
PABPC1-220ENST00000522658 SSR3Q9UNL2 185 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms