RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 HOXB5P09067 269 aa13.42□□□□□ -0.26
CLK4-211ENST00000522556 OR2K2Q8NGT1 345 aa13.42□□□□□ -0.26
CLK4-211ENST00000522556 OR1S1Q8NH92 325 aa13.42□□□□□ -0.26
CLK4-211ENST00000522556 UFC1Q9Y3C8 167 aa13.42□□□□□ -0.26
CLK4-211ENST00000522556 HTR2BP41595 481 aa13.41□□□□□ -0.26
CLK4-211ENST00000522556 CD81P60033 236 aa13.41□□□□□ -0.26
CLK4-211ENST00000522556 UBE2MP61081 183 aaKnown RBP13.41□□□□□ -0.26
CLK4-211ENST00000522556 C2orf83Q53S99 150 aa13.41□□□□□ -0.26
CLK4-211ENST00000522556 OR52B4Q8NGK2 314 aa13.41□□□□□ -0.26
CLK4-211ENST00000522556 TXN2Q99757 166 aa13.41□□□□□ -0.26
CLK4-211ENST00000522556 PALMDQ9NP74 551 aa13.41□□□□□ -0.26
CLK4-211ENST00000522556 DAZ1Q9NQZ3 744 aaKnown RBP13.41□□□□□ -0.26
CLK4-211ENST00000522556 C19orf73Q9NVV2 129 aa13.41□□□□□ -0.26
CLK4-211ENST00000522556 TECRQ9NZ01 308 aaKnown RBP13.41□□□□□ -0.26
CLK4-211ENST00000522556 IGHV3OR16-13A0A075B7E8 117 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 IGHV3-74A0A0B4J1X5 117 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 A0A1B0GU03 582 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 DUXBA0A1W2PPF3 345 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 LYRM1O43325 122 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 TMEM50AO95807 157 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 NPY1RP25929 384 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 SUB1P53999 127 aaKnown RBP eCLIP13.4□□□□□ -0.26
CLK4-211ENST00000522556 ELLP55199 621 aaPredicted RBP13.4□□□□□ -0.26
CLK4-211ENST00000522556 DHRS2Q13268 280 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 GGNBP1Q5YKI7 109 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 DUSP18Q8NEJ0 188 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 DTD1Q8TEA8 209 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 C7orf50Q9BRJ6 194 aaKnown RBP13.4□□□□□ -0.26
CLK4-211ENST00000522556 C20orf85Q9H1P6 137 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 ZFAND3Q9H8U3 227 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 MRPL27Q9P0M9 148 aaKnown RBP13.4□□□□□ -0.26
CLK4-211ENST00000522556 TBC1D24Q9ULP9 559 aa13.4□□□□□ -0.26
CLK4-211ENST00000522556 CORTO00230 105 aa13.39□□□□□ -0.27
CLK4-211ENST00000522556 YIF1AO95070 293 aa13.39□□□□□ -0.27
CLK4-211ENST00000522556 OR4E1P0C645 316 aa13.39□□□□□ -0.27
CLK4-211ENST00000522556 IAPPP10997 89 aa13.39□□□□□ -0.27
CLK4-211ENST00000522556 TOMM20LQ6UXN7 152 aa13.39□□□□□ -0.27
CLK4-211ENST00000522556 LYG2Q86SG7 212 aa13.39□□□□□ -0.27
CLK4-211ENST00000522556 GTSCR1Q86UQ5 136 aa13.39□□□□□ -0.27
CLK4-211ENST00000522556 NEURL2Q9BR09 285 aa13.39□□□□□ -0.27
CLK4-211ENST00000522556 MAGT1Q9H0U3 335 aa13.39□□□□□ -0.27
CLK4-211ENST00000522556 HUWE1Q7Z6Z7 4374 aaKnown RBP13.38□□□□□ -0.27
CLK4-211ENST00000522556 C15orf62A8K5M9 175 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 CENPXA8MT69 81 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 CLN5O75503 358 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 IGKV1-17P01599 117 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 APOHP02749 345 aaPredicted RBP13.38□□□□□ -0.27
CLK4-211ENST00000522556 NPBWR1P48145 328 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 RND2P52198 227 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 RELQ04864 619 aaPredicted RBP13.38□□□□□ -0.27
CLK4-211ENST00000522556 TIGITQ495A1 244 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 PRSS54Q6PEW0 395 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 DEFB125Q8N687 156 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 OR4X1Q8NH49 305 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 MARC2Q969Z3 335 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 OR10C1Q96KK4 312 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 CCDC32Q9BV29 185 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 GAR1Q9NY12 217 aaKnown RBP13.38□□□□□ -0.27
CLK4-211ENST00000522556 PTTG2Q9NZH5 202 aa13.38□□□□□ -0.27
CLK4-211ENST00000522556 PUS1Q9Y606 427 aaKnown RBP eCLIP13.38□□□□□ -0.27
CLK4-211ENST00000522556 TRAV6A0A075B6T7 132 aa13.37□□□□□ -0.27
CLK4-211ENST00000522556 K7EMT4 169 aa13.37□□□□□ -0.27
CLK4-211ENST00000522556 IFNA10P01566 189 aa13.37□□□□□ -0.27
CLK4-211ENST00000522556 HIPK2Q9H2X6 1198 aa13.37□□□□□ -0.27
CLK4-211ENST00000522556 SMPXQ9UHP9 88 aa13.37□□□□□ -0.27
CLK4-211ENST00000522556 TMED3Q9Y3Q3 217 aa13.37□□□□□ -0.27
CLK4-211ENST00000522556 IGHV3-66A0A0C4DH42 116 aa13.36□□□□□ -0.27
CLK4-211ENST00000522556 IGHV7-4-1A0A0J9YVY3 117 aa13.36□□□□□ -0.27
CLK4-211ENST00000522556 A8MZ25 164 aa13.36□□□□□ -0.27
CLK4-211ENST00000522556 IGLC1P0CG04 106 aa13.36□□□□□ -0.27
CLK4-211ENST00000522556 IFITM3Q01628 133 aa13.36□□□□□ -0.27
CLK4-211ENST00000522556 C4orf46Q504U0 113 aa13.36□□□□□ -0.27
CLK4-211ENST00000522556 ZNF600Q6ZNG1 722 aa13.36□□□□□ -0.27
CLK4-211ENST00000522556 LILRB2Q8N423 598 aa13.36□□□□□ -0.27
CLK4-211ENST00000522556 RNASEH2CQ8TDP1 164 aaKnown RBP13.36□□□□□ -0.27
CLK4-211ENST00000522556 RNF2Q99496 336 aa13.36□□□□□ -0.27
CLK4-211ENST00000522556 TENM3Q9P273 2699 aa13.36□□□□□ -0.27
CLK4-211ENST00000522556 CHEK1O14757 476 aa13.35□□□□□ -0.27
CLK4-211ENST00000522556 TCRBP04435 133 aa13.35□□□□□ -0.27
CLK4-211ENST00000522556 SLC25A6P12236 298 aa13.35□□□□□ -0.27
CLK4-211ENST00000522556 LINC00299Q6ZSB3 139 aa13.35□□□□□ -0.27
CLK4-211ENST00000522556 SLC16A13Q7RTY0 426 aa13.35□□□□□ -0.27
CLK4-211ENST00000522556 TMEM116Q8NCL8 245 aa13.35□□□□□ -0.27
CLK4-211ENST00000522556 ST8SIA2Q92186 375 aa13.35□□□□□ -0.27
CLK4-211ENST00000522556 SEC22CQ9BRL7 303 aa13.35□□□□□ -0.27
CLK4-211ENST00000522556 RHPN1-AS1Q9BWJ2 59 aa13.35□□□□□ -0.27
CLK4-211ENST00000522556 NUDT15Q9NV35 164 aa13.35□□□□□ -0.27
CLK4-211ENST00000522556 U3KQK5 164 aa13.35□□□□□ -0.27
CLK4-211ENST00000522556 RPS10-NUDT3A0A1W2PQS6 291 aa13.34□□□□□ -0.27
CLK4-211ENST00000522556 RBMY1BA6NDE4 496 aaKnown RBP13.34□□□□□ -0.27
CLK4-211ENST00000522556 RBMY1EA6NEQ0 496 aaKnown RBP13.34□□□□□ -0.27
CLK4-211ENST00000522556 OR11H12B2RN74 326 aa13.34□□□□□ -0.27
CLK4-211ENST00000522556 RBMY1DP0C7P1 496 aaKnown RBP13.34□□□□□ -0.27
CLK4-211ENST00000522556 RBPMS2Q6ZRY4 209 aaKnown RBP13.34□□□□□ -0.27
CLK4-211ENST00000522556 S100ZQ8WXG8 99 aa13.34□□□□□ -0.27
CLK4-211ENST00000522556 NPIPB3Q92617 1050 aa13.34□□□□□ -0.27
CLK4-211ENST00000522556 ACY3Q96HD9 319 aa13.34□□□□□ -0.27
CLK4-211ENST00000522556 CITED4Q96RK1 184 aa13.34□□□□□ -0.27
CLK4-211ENST00000522556 SRD5A3Q9H8P0 318 aa13.34□□□□□ -0.27
CLK4-211ENST00000522556 UBQLN2Q9UHD9 624 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms