RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 CFHR3Q02985 330 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 STOML3Q8TAV4 291 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 WDR61Q9GZS3 305 aaKnown RBP16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 NIPBLQ6KC79 2804 aaeCLIP16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 PF4V1P10720 104 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 RND2P52198 227 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 ACSM6Q6P461 480 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 BTNL8Q6UX41 500 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 TREML4Q6UXN2 200 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 SCARB1Q8WTV0 552 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 NPIPB3Q92617 1050 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 SERTAD4Q9NUC0 356 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 MRPL36Q9P0J6 103 aaKnown RBP16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 WDR83OSQ9Y284 106 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 S4R3C0 116 aa16.7■□□□□ 0.26
R3HCC1-208ENST00000522012 TRBV9A0A0B4J1U6 114 aa16.69■□□□□ 0.26
R3HCC1-208ENST00000522012 TRGV3P03979 118 aa16.69■□□□□ 0.26
R3HCC1-208ENST00000522012 SLC35B1P78383 322 aa16.69■□□□□ 0.26
R3HCC1-208ENST00000522012 KLK9Q2XQG4 91 aa16.69■□□□□ 0.26
R3HCC1-208ENST00000522012 NECAP1Q8NC96 275 aa16.69■□□□□ 0.26
R3HCC1-208ENST00000522012 PARD6GQ9BYG4 376 aaPredicted RBP16.69■□□□□ 0.26
R3HCC1-208ENST00000522012 ARV1Q9H2C2 271 aa16.69■□□□□ 0.26
R3HCC1-208ENST00000522012 KLK9Q9UKQ9 250 aa16.69■□□□□ 0.26
R3HCC1-208ENST00000522012 PSMB11A5LHX3 300 aa16.68■□□□□ 0.26
R3HCC1-208ENST00000522012 H3BUA1 57 aa16.68■□□□□ 0.26
R3HCC1-208ENST00000522012 CFDP00746 253 aaPredicted RBP16.68■□□□□ 0.26
R3HCC1-208ENST00000522012 IGLV1-40P01703 118 aa16.68■□□□□ 0.26
R3HCC1-208ENST00000522012 RUNX1Q01196 453 aa16.68■□□□□ 0.26
R3HCC1-208ENST00000522012 TEPPQ6URK8 271 aa16.68■□□□□ 0.26
R3HCC1-208ENST00000522012 TMEM144Q7Z5S9 345 aa16.68■□□□□ 0.26
R3HCC1-208ENST00000522012 CENPVQ7Z7K6 275 aaPredicted RBP16.68■□□□□ 0.26
R3HCC1-208ENST00000522012 GINS3Q9BRX5 216 aa16.68■□□□□ 0.26
R3HCC1-208ENST00000522012 SLA2Q9H6Q3 261 aa16.68■□□□□ 0.26
R3HCC1-208ENST00000522012 MFSD2BA6NFX1 497 aa16.67■□□□□ 0.26
R3HCC1-208ENST00000522012 MDKP21741 143 aaPredicted RBP16.67■□□□□ 0.26
R3HCC1-208ENST00000522012 ATP6V0CP27449 155 aa16.67■□□□□ 0.26
R3HCC1-208ENST00000522012 TPPP2P59282 170 aa16.67■□□□□ 0.26
R3HCC1-208ENST00000522012 SRSF2Q01130 221 aaKnown RBP16.67■□□□□ 0.26
R3HCC1-208ENST00000522012 C15orf32Q32M92 178 aa16.67■□□□□ 0.26
R3HCC1-208ENST00000522012 C10orf99Q6UWK7 81 aa16.67■□□□□ 0.26
R3HCC1-208ENST00000522012 SH3BGRL3Q9H299 93 aa16.67■□□□□ 0.26
R3HCC1-208ENST00000522012 IGHV3-23P01764 117 aa16.66■□□□□ 0.26
R3HCC1-208ENST00000522012 IGHG4P01861 327 aa16.66■□□□□ 0.26
R3HCC1-208ENST00000522012 IFITM2Q01629 132 aa16.66■□□□□ 0.26
R3HCC1-208ENST00000522012 ATP5G2Q06055 141 aa16.66■□□□□ 0.26
R3HCC1-208ENST00000522012 TEX261Q6UWH6 196 aa16.66■□□□□ 0.26
R3HCC1-208ENST00000522012 TMEM116Q8NCL8 245 aa16.66■□□□□ 0.26
R3HCC1-208ENST00000522012 VN1R17PQ8TDU5 208 aa16.66■□□□□ 0.26
R3HCC1-208ENST00000522012 GNPNAT1Q96EK6 184 aaPredicted RBP16.66■□□□□ 0.26
R3HCC1-208ENST00000522012 RSG1Q9BU20 258 aa16.66■□□□□ 0.26
R3HCC1-208ENST00000522012 SLC25A32Q9H2D1 315 aa16.66■□□□□ 0.26
R3HCC1-208ENST00000522012 KLK15Q9H2R5 256 aa16.66■□□□□ 0.26
R3HCC1-208ENST00000522012 RFNGQ9Y644 331 aa16.66■□□□□ 0.26
R3HCC1-208ENST00000522012 FAM223BA6NKX1 122 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 BRI3O95415 125 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 MFAP4P55083 255 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 ALKAL2Q6UX46 152 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 LCNL1Q6ZST4 164 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 FAM223AQ8IWN6 122 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 ZNF709Q8N972 641 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 OR4X1Q8NH49 305 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 CXorf58Q96LI9 332 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 MGST2Q99735 147 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 C21orf62Q9NYP8 219 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 LSM4Q9Y4Z0 139 aaKnown RBP16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 ZFP92A6NM28 416 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 MPDU1O75352 247 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 RAB9AP51151 201 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 RAB31Q13636 194 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 Q56UQ5 140 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 TEX38Q6PEX7 206 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 TMED6Q8WW62 240 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 NPCDR1Q9BY65 106 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 C16orf95Q9H693 158 aa16.65■□□□□ 0.26
R3HCC1-208ENST00000522012 FN1P02751 2386 aaKnown RBP16.64■□□□□ 0.25
R3HCC1-208ENST00000522012 IGKV1OR2-108A0A075B7D4 117 aa16.64■□□□□ 0.25
R3HCC1-208ENST00000522012 AGPAT2O15120 278 aa16.64■□□□□ 0.25
R3HCC1-208ENST00000522012 OR10J1P30954 320 aa16.64■□□□□ 0.25
R3HCC1-208ENST00000522012 CAMLGP49069 296 aa16.64■□□□□ 0.25
R3HCC1-208ENST00000522012 EIF5AL1Q6IS14 154 aaKnown RBP16.64■□□□□ 0.25
R3HCC1-208ENST00000522012 ZNF680Q8NEM1 530 aa16.64■□□□□ 0.25
R3HCC1-208ENST00000522012 TMEM89A2RUT3 159 aa16.63■□□□□ 0.25
R3HCC1-208ENST00000522012 C17orf112F2Z3M2 114 aa16.63■□□□□ 0.25
R3HCC1-208ENST00000522012 CLN5O75503 358 aa16.63■□□□□ 0.25
R3HCC1-208ENST00000522012 SPP1P10451 314 aa16.63■□□□□ 0.25
R3HCC1-208ENST00000522012 PSMB8P28062 276 aa16.63■□□□□ 0.25
R3HCC1-208ENST00000522012 NPBWR1P48145 328 aa16.63■□□□□ 0.25
R3HCC1-208ENST00000522012 THAP8Q8NA92 274 aa16.63■□□□□ 0.25
R3HCC1-208ENST00000522012 OR2G3Q8NGZ4 309 aa16.63■□□□□ 0.25
R3HCC1-208ENST00000522012 EEF1AKMT3Q96AZ1 226 aa16.63■□□□□ 0.25
R3HCC1-208ENST00000522012 PHYHIPLQ96FC7 376 aa16.63■□□□□ 0.25
R3HCC1-208ENST00000522012 USMG5Q96IX5 58 aa16.63■□□□□ 0.25
R3HCC1-208ENST00000522012 GNG7O60262 68 aa16.62■□□□□ 0.25
R3HCC1-208ENST00000522012 NDUFA7O95182 113 aa16.62■□□□□ 0.25
R3HCC1-208ENST00000522012 IFNA7P01567 189 aa16.62■□□□□ 0.25
R3HCC1-208ENST00000522012 SEC11BP0C7V7 166 aa16.62■□□□□ 0.25
R3HCC1-208ENST00000522012 FOXE3Q13461 319 aa16.62■□□□□ 0.25
R3HCC1-208ENST00000522012 LINC01006Q8NI28 216 aa16.62■□□□□ 0.25
R3HCC1-208ENST00000522012 ZNF502Q8TBZ5 544 aa16.62■□□□□ 0.25
R3HCC1-208ENST00000522012 GGTLC1Q9BX51 225 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms