RNA–Protein interactions for RNA: ENST00000520417.1

SKP1-207, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-207ENST00000520417 H3F3AP84243 136 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 PRB3Q04118 309 aaPredicted RBP0.8□□□□□ -2.28
SKP1-207ENST00000520417 FADDQ13158 208 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 IAH1Q2TAA2 248 aaPredicted RBP0.8□□□□□ -2.28
SKP1-207ENST00000520417 AKIRIN2Q53H80 203 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 KHDC3LQ587J8 217 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 MIR17HGQ75NE6 70 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 TRAPPC6BQ86SZ2 158 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 OOSP2Q86WS3 158 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 SLC25A40Q8TBP6 338 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 ODF3Q96PU9 254 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 NMNAT1Q9HAN9 279 aaPredicted RBP0.8□□□□□ -2.28
SKP1-207ENST00000520417 OSTCQ9NRP0 149 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 CKLFQ9UBR5 152 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 SLC22A13Q9Y226 551 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 ERGIC3Q9Y282 383 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 ARL2BPQ9Y2Y0 163 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 FAM32AQ9Y421 112 aaKnown RBP0.8□□□□□ -2.28
SKP1-207ENST00000520417 ZFYVE9O95405 1425 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 WRNQ14191 1432 aaPredicted RBP eCLIP0.8□□□□□ -2.28
SKP1-207ENST00000520417 RALGAPA2Q2PPJ7 1873 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 PLB1Q6P1J6 1458 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 BRWD1Q9NSI6 2320 aa0.8□□□□□ -2.28
SKP1-207ENST00000520417 MICAL3Q7RTP6 2002 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 hADV38S2A0JD32 116 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 FUOMA2VDF0 154 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 C1orf196B1AJZ1 125 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 IGKV1-5P01602 117 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 SERPINE1P05121 402 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 PRB4P10163 310 aaPredicted RBP0.79□□□□□ -2.28
SKP1-207ENST00000520417 CRYGAP11844 174 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 SPI1P17947 270 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 PPIBP23284 216 aaKnown RBP0.79□□□□□ -2.28
SKP1-207ENST00000520417 CCL7P80098 99 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 MRPS15P82914 257 aaKnown RBP0.79□□□□□ -2.28
SKP1-207ENST00000520417 TMEM97Q5BJF2 176 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 C10orf55Q5SWW7 151 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 OR6V1Q8N148 313 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 HIST3H2BBQ8N257 126 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 C12orf29Q8N999 325 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 OR52R1Q8NGF1 315 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 OR51A2Q8NGJ7 313 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 OR8D4Q8NGM9 314 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 CEP19Q96LK0 163 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 TSPAN32Q96QS1 320 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 TRABDQ9H4I3 376 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 TP73-AS1Q9UF72 201 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 CYSLTR1Q9Y271 337 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 CCDC88AQ3V6T2 1871 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 MTUS2Q5JR59 1369 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 MYOFQ9NZM1 2061 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 ARFGEF3Q5TH69 2177 aa0.79□□□□□ -2.28
SKP1-207ENST00000520417 CPAMD8Q8IZJ3 1885 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 DOCK5Q9H7D0 1870 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 CLDN25C9JDP6 229 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 GEMIN2O14893 280 aaKnown RBP0.78□□□□□ -2.28
SKP1-207ENST00000520417 HCRTO43612 131 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 OR7C1O76099 320 aaPredicted RBP0.78□□□□□ -2.28
SKP1-207ENST00000520417 TCL1BO95988 128 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 SHBGP04278 402 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 IFNA6P05013 189 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 C8GP07360 202 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 SMIM10L2AP0DMW4 78 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 SMIM10L2BP0DMW5 78 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 FKBP2P26885 142 aaKnown RBP0.78□□□□□ -2.28
SKP1-207ENST00000520417 ZNF80P51504 273 aaPredicted RBP0.78□□□□□ -2.28
SKP1-207ENST00000520417 ZNF846Q147U1 533 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 TMED2Q15363 201 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 RHEBQ15382 184 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.78□□□□□ -2.28
SKP1-207ENST00000520417 Q6ZQT0 140 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 S100A7AQ86SG5 101 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 GDPD1Q8N9F7 314 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 TERB2Q8NHR7 220 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 CHMP6Q96FZ7 201 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 C9orf16Q9BUW7 83 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 C20orf27Q9GZN8 174 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 ENY2Q9NPA8 101 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 ACER3Q9NUN7 267 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 TVP23BQ9NYZ1 205 aa0.78□□□□□ -2.28
SKP1-207ENST00000520417 UTP11Q9Y3A2 253 aaKnown RBP0.78□□□□□ -2.28
SKP1-207ENST00000520417 INTS1Q8N201 2190 aaKnown RBP0.78□□□□□ -2.28
SKP1-207ENST00000520417 BUB1B-PAK6H3BSN5 160 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 FADS1O60427 444 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 ZNF682O95780 498 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 SERPINA1P01009 418 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 CTXN2P0C2S0 81 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 MGST1P10620 155 aaKnown RBP0.77□□□□□ -2.29
SKP1-207ENST00000520417 ERP29P30040 261 aaKnown RBP0.77□□□□□ -2.29
SKP1-207ENST00000520417 YPEL3P61236 119 aaPredicted RBP0.77□□□□□ -2.29
SKP1-207ENST00000520417 EIF5AP63241 154 aaKnown RBP0.77□□□□□ -2.29
SKP1-207ENST00000520417 C12orf74Q32Q52 190 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 LIN52Q52LA3 116 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 RNASE10Q5GAN6 216 aaKnown RBP0.77□□□□□ -2.29
SKP1-207ENST00000520417 LYRM7Q5U5X0 104 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 Q6Q795 121 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 PHF13Q86YI8 300 aaPredicted RBP0.77□□□□□ -2.29
SKP1-207ENST00000520417 OR4D11Q8NGI4 311 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 PFN4Q8NHR9 129 aa0.77□□□□□ -2.29
SKP1-207ENST00000520417 GNPDA2Q8TDQ7 276 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms