RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 IL6RP08887 468 aaPredicted RBP9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 CD24P25063 80 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 RELBQ01201 579 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 C19orf35Q6ZS72 473 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 GOLT1AQ6ZVE7 132 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 TMEM256Q8N2U0 113 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 OR4B1Q8NGF8 309 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 NEU1Q99519 415 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 SONP18583 2426 aaKnown RBP9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 ZNF497Q6ZNH5 498 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 SRSF12Q8WXF0 261 aaKnown RBP9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 MRPL20Q9BYC9 149 aaKnown RBP9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 CGAP01215 116 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 SELLP14151 372 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 TM4SF20Q53R12 229 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 TMEM14EPQ6UXP3 125 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 SCGB1D4Q6XE38 83 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 LINC00305Q7Z4B0 112 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 METTL26Q96S19 204 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 RAXQ9Y2V3 346 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 PLCE1Q9P212 2302 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 NUP210LQ5VU65 1888 aa9.01□□□□□ -0.97
PCDHGA1-202ENST00000517417 ZNF738Q8NE65 137 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 OSR1Q8TAX0 266 aaPredicted RBP9□□□□□ -0.97
PCDHGA1-202ENST00000517417 RNASEH2CQ8TDP1 164 aaKnown RBP9□□□□□ -0.97
PCDHGA1-202ENST00000517417 DPM3Q9P2X0 92 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 ARFGEF3Q5TH69 2177 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 SS18L1O75177 396 aaPredicted RBP9□□□□□ -0.97
PCDHGA1-202ENST00000517417 SERF1AO75920 110 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 CDKN1AP38936 164 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 ZNF841Q6ZN19 808 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 SLC25A33Q9BSK2 321 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 DERL1Q9BUN8 251 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 TNRC18O15417 2968 aaPredicted RBP9□□□□□ -0.97
PCDHGA1-202ENST00000517417 MUC3AQ02505 3323 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9□□□□□ -0.97
PCDHGA1-202ENST00000517417 LILRA1O75019 489 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 NTF4P34130 210 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 NBL1P41271 181 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 CRIP3Q6Q6R5 217 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 GTF2H5Q6ZYL4 71 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 IGKV3D-15A0A087WSY6 115 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 IGHV1-18A0A0C4DH31 117 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 A6NNC1 897 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 NPIPB11E5RHQ5 1161 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 IGKV3-15P01624 115 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 B3GALT5-AS1P59052 145 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 LINC01551Q86U37 167 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 IL36BQ9NZH7 164 aa9□□□□□ -0.97
PCDHGA1-202ENST00000517417 NCOA6Q14686 2063 aaPredicted RBP8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 ZNF207O43670 478 aaKnown RBP8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 KIR2DL2P43627 348 aaPredicted RBP8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 CENPWQ5EE01 88 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 ZGRF1Q86YA3 2104 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 FRYLO94915 3013 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 MT-ND6P03923 174 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 SRIP30626 198 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 CKS2P33552 79 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 C1orf194Q5T5A4 169 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 IFI27L2Q9H2X8 130 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 IGHV3-66A0A0C4DH42 116 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 IGKV1D-33P01593 117 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 IGKV1-33P01594 117 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 IGKV1-39P01597 117 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 IGKV1D-39P04432 117 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 CD99P14209 185 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 ZNF585BQ52M93 769 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 TMEM97Q5BJF2 176 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 HAPLN4Q86UW8 402 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 MIEN1Q9BRT3 115 aa8.99□□□□□ -0.97
PCDHGA1-202ENST00000517417 SAA2-SAA4A0A096LPE2 208 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 IL18BPO95998 194 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 NBEAP1P0C6P0 100 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 SAA2P0DJI9 122 aaPredicted RBP8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 TEX38Q6PEX7 206 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 CRIM1Q9NZV1 1036 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 WNK1Q9H4A3 2382 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 TRBV6-6A0A0A6YYG2 114 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 A0A1B0GUS0 222 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 PSPNO60542 156 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 CD33P20138 364 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 OR10J6PQ8NGY7 276 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 RNF138Q8WVD3 245 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 PROK2Q9HC23 129 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 UQCR10Q9UDW1 63 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 J3QR89 54 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 HAX1O00165 279 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 HLA-DQA1P01909 254 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 AMY1AP04745 511 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 BTF3P20290 206 aaKnown RBP8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 ID1P41134 155 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 COMPP49747 757 aaPredicted RBP8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 FOXA3P55318 350 aaPredicted RBP8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 MORN2Q502X0 79 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 HSPB8Q9UJY1 196 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 IGHV3OR16-12A0A075B7B8 117 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 TM4SF5O14894 197 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 IGKV3-20P01619 116 aa8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 HINT1P49773 126 aaPredicted RBP8.98□□□□□ -0.97
PCDHGA1-202ENST00000517417 LY6DQ14210 128 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms