RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 IFI30P13284 250 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 DEFB103AP81534 67 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 ZNF345Q14585 488 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 RRN3P1Q2M238 152 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 LCN15Q6UWW0 184 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 Q6ZQT0 140 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 Q6ZRN7 208 aaPredicted RBP1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 ZNF826PQ6ZT77 177 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 HIST3H2BBQ8N257 126 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 SIGLECL1Q8N7X8 197 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 ADAT3Q96EY9 351 aaPredicted RBP1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 CENPHQ9H3R5 247 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 LYRM2Q9NU23 88 aaPredicted RBP1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 MAST2Q6P0Q8 1798 aa1.38□□□□□ -2.19
RNU6-840P-201ENST00000517275 WDR90Q96KV7 1748 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 BAHCC1Q9P281 2608 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 PLXNA3P51805 1871 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 CUL9Q8IWT3 2517 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 TONSLQ96HA7 1378 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 A0A087X0T9 212 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 ATG12O94817 140 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 IFNA7P01567 189 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 CTSDP07339 412 aaPredicted RBP1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 TRGC1P0CF51 173 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 SMIM17P0DL12 118 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 S100A4P26447 101 aaKnown RBP1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 SRIP30626 198 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 ATP5G3P48201 142 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 AQP4P55087 323 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 PIGPP57054 158 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 B2MP61769 119 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 Q1T7F1 81 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 AKR1C8PQ5T2L2 129 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 LYRM7Q5U5X0 104 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 FAM173BQ6P4H8 233 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 LRRC28Q86X40 367 aaPredicted RBP1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 ZNF439Q8NDP4 499 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 RNASE11Q8TAA1 199 aaKnown RBP1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 SLAMF6Q96DU3 332 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 GINS3Q9BRX5 216 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 PBOV1Q9GZY1 135 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 OSTCQ9NRP0 149 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 NHP2Q9NX24 153 aaKnown RBP1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 SMPXQ9UHP9 88 aa1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 AMMECR1Q9Y4X0 333 aaPredicted RBP1.37□□□□□ -2.19
RNU6-840P-201ENST00000517275 KIF24Q5T7B8 1368 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 KIF13BQ9NQT8 1826 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 IGKV1-9A0A0C4DH69 117 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 C7orf71A4D174 169 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 TMEM212A6NML5 194 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 SDCBPO00560 298 aaPredicted RBP1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 NDUFC2O95298 119 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 PMP2P02689 132 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 RNASE4P34096 147 aaKnown RBP1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 CRYBA4P53673 196 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 KRTAP12-1P59990 96 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 NCALDP61601 193 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 GNG3P63215 75 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 SLC38A11Q08AI6 406 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 NNATQ16517 81 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 RIC1Q4ADV7 1423 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 SCGB2B2Q4G0G5 96 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 STX12Q86Y82 276 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 BPIFA4PQ86YQ2 179 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 CLVS1Q8IUQ0 354 aaPredicted RBP1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 NUP35Q8NFH5 326 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 OR4D11Q8NGI4 311 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 NEK7Q8TDX7 302 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 TEX37Q96LM6 180 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 YIPF3Q9GZM5 350 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 UFC1Q9Y3C8 167 aa1.36□□□□□ -2.19
RNU6-840P-201ENST00000517275 H7C1C5 153 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 MIFP14174 115 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 PHBP35232 272 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 LCN6P62502 163 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 RHEBQ15382 184 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 ARHGAP11BQ3KRB8 267 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 DPPA3Q6W0C5 159 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 GRINAQ7Z429 371 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 C3orf56Q8N813 242 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 OR5A1Q8NGJ0 315 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 OR8D4Q8NGM9 314 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 OR13C6PQ8NH95 151 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 WFDC5Q8TCV5 224 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 FAM172AQ8WUF8 416 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 CANT1Q8WVQ1 401 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 HOPXQ9BPY8 73 aaPredicted RBP1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 BIN3Q9NQY0 253 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 ACER3Q9NUN7 267 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 GID8Q9NWU2 228 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 UTP11Q9Y3A2 253 aaKnown RBP1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 FN1P02751 2386 aaKnown RBP1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 RTTNQ86VV8 2226 aa1.35□□□□□ -2.19
RNU6-840P-201ENST00000517275 GREB1Q4ZG55 1949 aa1.34□□□□□ -2.19
RNU6-840P-201ENST00000517275 CLDN25C9JDP6 229 aa1.34□□□□□ -2.19
RNU6-840P-201ENST00000517275 PPP5D1E7EU14 171 aa1.34□□□□□ -2.19
RNU6-840P-201ENST00000517275 M0R378 163 aa1.34□□□□□ -2.19
RNU6-840P-201ENST00000517275 HMGB3O15347 200 aaKnown RBP1.34□□□□□ -2.19
RNU6-840P-201ENST00000517275 CYB5BO43169 146 aa1.34□□□□□ -2.19
RNU6-840P-201ENST00000517275 MFSD11O43934 449 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms