RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 ATP6V1FQ16864 119 aa13.08□□□□□ -0.32
AP3S1-208ENST00000515066 TREML4Q6UXN2 200 aa13.08□□□□□ -0.32
AP3S1-208ENST00000515066 NECAP1Q8NC96 275 aa13.08□□□□□ -0.32
AP3S1-208ENST00000515066 FBXL7Q9UJT9 491 aa13.08□□□□□ -0.32
AP3S1-208ENST00000515066 TENM1Q9UKZ4 2725 aa13.07□□□□□ -0.32
AP3S1-208ENST00000515066 F8W735 103 aaPredicted RBP13.07□□□□□ -0.32
AP3S1-208ENST00000515066 CYB5BO43169 146 aa13.07□□□□□ -0.32
AP3S1-208ENST00000515066 DFFBO76075 338 aa13.07□□□□□ -0.32
AP3S1-208ENST00000515066 PF4V1P10720 104 aa13.07□□□□□ -0.32
AP3S1-208ENST00000515066 C15orf32Q32M92 178 aa13.07□□□□□ -0.32
AP3S1-208ENST00000515066 TMEM116Q8NCL8 245 aa13.07□□□□□ -0.32
AP3S1-208ENST00000515066 THYN1Q9P016 225 aa13.07□□□□□ -0.32
AP3S1-208ENST00000515066 LSM4Q9Y4Z0 139 aaKnown RBP13.07□□□□□ -0.32
AP3S1-208ENST00000515066 S4R3C0 116 aa13.07□□□□□ -0.32
AP3S1-208ENST00000515066 TRGV3P03979 118 aa13.06□□□□□ -0.32
AP3S1-208ENST00000515066 RAB9AP51151 201 aa13.06□□□□□ -0.32
AP3S1-208ENST00000515066 RND2P52198 227 aa13.06□□□□□ -0.32
AP3S1-208ENST00000515066 ZNF266Q14584 549 aa13.06□□□□□ -0.32
AP3S1-208ENST00000515066 KLHDC1Q8N7A1 406 aa13.06□□□□□ -0.32
AP3S1-208ENST00000515066 RNF152Q8N8N0 203 aa13.06□□□□□ -0.32
AP3S1-208ENST00000515066 UBAC2Q8NBM4 344 aa13.06□□□□□ -0.32
AP3S1-208ENST00000515066 MYOZ3Q8TDC0 251 aa13.06□□□□□ -0.32
AP3S1-208ENST00000515066 ZNF471Q9BX82 626 aaPredicted RBP13.06□□□□□ -0.32
AP3S1-208ENST00000515066 SLA2Q9H6Q3 261 aa13.06□□□□□ -0.32
AP3S1-208ENST00000515066 RPS10-NUDT3A0A1W2PQS6 291 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 SMCO3A2RU48 225 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 TMEM89A2RUT3 159 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 FAM223BA6NKX1 122 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 TPPP2P59282 170 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 SLC35B1P78383 322 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 FOXE3Q13461 319 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 KIAA0141Q14154 515 aaPredicted RBP13.05□□□□□ -0.32
AP3S1-208ENST00000515066 ETFRF1Q6IPR1 90 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 TEX38Q6PEX7 206 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 FAM223AQ8IWN6 122 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 VN1R17PQ8TDU5 208 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 ACY3Q96HD9 319 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 WDR83OSQ9Y284 106 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 JTBO76095 146 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 ELANEP08246 267 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 AKR1C1Q04828 323 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 TCTEX1D4Q5JR98 221 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 TMEM144Q7Z5S9 345 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 CENPVQ7Z7K6 275 aaPredicted RBP13.05□□□□□ -0.32
AP3S1-208ENST00000515066 OR4F5Q8NH21 305 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 OR4X1Q8NH49 305 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 STOML3Q8TAV4 291 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 ZNF502Q8TBZ5 544 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 NPIPB3Q92617 1050 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 SLC35E1Q96K37 410 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 CCDC140Q96MF4 163 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 PARD6GQ9BYG4 376 aaPredicted RBP13.05□□□□□ -0.32
AP3S1-208ENST00000515066 WDR61Q9GZS3 305 aaKnown RBP13.05□□□□□ -0.32
AP3S1-208ENST00000515066 ARV1Q9H2C2 271 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 NPVFQ9HCQ7 196 aa13.05□□□□□ -0.32
AP3S1-208ENST00000515066 IGKV1D-37A0A075B6S9 117 aa13.04□□□□□ -0.32
AP3S1-208ENST00000515066 IGHV3-23P01764 117 aa13.04□□□□□ -0.32
AP3S1-208ENST00000515066 RPLP1P05386 114 aaKnown RBP13.04□□□□□ -0.32
AP3S1-208ENST00000515066 C4BPBP20851 252 aa13.04□□□□□ -0.32
AP3S1-208ENST00000515066 RUNX1Q01196 453 aa13.04□□□□□ -0.32
AP3S1-208ENST00000515066 SLC51BQ86UW2 128 aa13.04□□□□□ -0.32
AP3S1-208ENST00000515066 C21orf62Q9NYP8 219 aa13.04□□□□□ -0.32
AP3S1-208ENST00000515066 FCGR2BP31994 310 aaPredicted RBP13.03□□□□□ -0.32
AP3S1-208ENST00000515066 PROK1P58294 105 aa13.03□□□□□ -0.32
AP3S1-208ENST00000515066 ACSM6Q6P461 480 aa13.03□□□□□ -0.32
AP3S1-208ENST00000515066 PRIMA1Q86XR5 153 aa13.03□□□□□ -0.32
AP3S1-208ENST00000515066 THAP8Q8NA92 274 aa13.03□□□□□ -0.32
AP3S1-208ENST00000515066 OR5AU1Q8NGC0 362 aa13.03□□□□□ -0.32
AP3S1-208ENST00000515066 CXorf58Q96LI9 332 aa13.03□□□□□ -0.32
AP3S1-208ENST00000515066 RFNGQ9Y644 331 aa13.03□□□□□ -0.32
AP3S1-208ENST00000515066 FBN1P35555 2871 aaKnown RBP13.03□□□□□ -0.32
AP3S1-208ENST00000515066 BORCS7-ASMTA0A0B4J1R7 106 aa13.02□□□□□ -0.32
AP3S1-208ENST00000515066 IFNA5P01569 189 aa13.02□□□□□ -0.32
AP3S1-208ENST00000515066 TEPPQ6URK8 271 aa13.02□□□□□ -0.32
AP3S1-208ENST00000515066 BTNL8Q6UX41 500 aa13.02□□□□□ -0.32
AP3S1-208ENST00000515066 COMMD1Q8N668 190 aa13.02□□□□□ -0.32
AP3S1-208ENST00000515066 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.02□□□□□ -0.32
AP3S1-208ENST00000515066 HSD17B11Q8NBQ5 300 aa13.02□□□□□ -0.32
AP3S1-208ENST00000515066 ST8SIA2Q92186 375 aa13.02□□□□□ -0.32
AP3S1-208ENST00000515066 USMG5Q96IX5 58 aa13.02□□□□□ -0.32
AP3S1-208ENST00000515066 MGST2Q99735 147 aa13.02□□□□□ -0.32
AP3S1-208ENST00000515066 RSG1Q9BU20 258 aa13.02□□□□□ -0.32
AP3S1-208ENST00000515066 NPCDR1Q9BY65 106 aa13.02□□□□□ -0.32
AP3S1-208ENST00000515066 RNF114Q9Y508 228 aa13.02□□□□□ -0.32
AP3S1-208ENST00000515066 CLPSL1A2RUU4 121 aa13.02□□□□□ -0.33
AP3S1-208ENST00000515066 CLN5O75503 358 aa13.02□□□□□ -0.33
AP3S1-208ENST00000515066 IGLC1P0CG04 106 aa13.02□□□□□ -0.33
AP3S1-208ENST00000515066 FGF7P21781 194 aa13.02□□□□□ -0.33
AP3S1-208ENST00000515066 ATP5G2Q06055 141 aa13.02□□□□□ -0.33
AP3S1-208ENST00000515066 GINS3Q9BRX5 216 aa13.02□□□□□ -0.33
AP3S1-208ENST00000515066 SH3BGRL3Q9H299 93 aa13.02□□□□□ -0.33
AP3S1-208ENST00000515066 WNK1Q9H4A3 2382 aa13.01□□□□□ -0.33
AP3S1-208ENST00000515066 CFDP00746 253 aaPredicted RBP13.01□□□□□ -0.33
AP3S1-208ENST00000515066 IGKV1-17P01599 117 aa13.01□□□□□ -0.33
AP3S1-208ENST00000515066 ATP6V0CP27449 155 aa13.01□□□□□ -0.33
AP3S1-208ENST00000515066 MFAP4P55083 255 aa13.01□□□□□ -0.33
AP3S1-208ENST00000515066 BAP18Q8IXM2 172 aa13.01□□□□□ -0.33
AP3S1-208ENST00000515066 ZNF491Q8N8L2 437 aa13.01□□□□□ -0.33
AP3S1-208ENST00000515066 GGTLC1Q9BX51 225 aa13.01□□□□□ -0.33
AP3S1-208ENST00000515066 TRBV7-1A0A0A6YYK4 115 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms