RNA–Protein interactions for RNA: ENST00000512392.5

CHD1-208, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 2

Gene CHD1, Length 1,968 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-208ENST00000512392 CD7P09564 240 aa4.4□□□□□ -1.7
CHD1-208ENST00000512392 ZNF883P0CG24 379 aa4.4□□□□□ -1.7
CHD1-208ENST00000512392 GNB2P62879 340 aa4.4□□□□□ -1.7
CHD1-208ENST00000512392 HOXC5Q00444 222 aa4.4□□□□□ -1.7
CHD1-208ENST00000512392 LGALS9BQ3B8N2 356 aa4.4□□□□□ -1.7
CHD1-208ENST00000512392 LINC01554Q52M75 96 aa4.4□□□□□ -1.7
CHD1-208ENST00000512392 LGALS9CQ6DKI2 356 aa4.4□□□□□ -1.7
CHD1-208ENST00000512392 MORN3Q6PF18 240 aaPredicted RBP4.4□□□□□ -1.7
CHD1-208ENST00000512392 NAT14Q8WUY8 206 aa4.4□□□□□ -1.7
CHD1-208ENST00000512392 DPH3Q96FX2 82 aa4.4□□□□□ -1.7
CHD1-208ENST00000512392 B9D2Q9BPU9 175 aa4.4□□□□□ -1.7
CHD1-208ENST00000512392 SHANK2-AS3Q9BTD1 123 aa4.4□□□□□ -1.7
CHD1-208ENST00000512392 PLXNB3Q9ULL4 1909 aa4.4□□□□□ -1.71
CHD1-208ENST00000512392 KDM5AP29375 1690 aaKnown RBP4.4□□□□□ -1.71
CHD1-208ENST00000512392 KRASP01116 189 aa4.4□□□□□ -1.71
CHD1-208ENST00000512392 PRM2P04554 102 aa4.4□□□□□ -1.71
CHD1-208ENST00000512392 ZNF93P35789 620 aaPredicted RBP4.4□□□□□ -1.71
CHD1-208ENST00000512392 ARPP19P56211 112 aa4.4□□□□□ -1.71
CHD1-208ENST00000512392 HBBP68871 147 aa4.4□□□□□ -1.71
CHD1-208ENST00000512392 LUZP6Q538Z0 58 aa4.4□□□□□ -1.71
CHD1-208ENST00000512392 C22orf39Q6P5X5 142 aa4.4□□□□□ -1.71
CHD1-208ENST00000512392 MRPL32Q9BYC8 188 aaKnown RBP4.4□□□□□ -1.71
CHD1-208ENST00000512392 ATG2AQ2TAZ0 1938 aa4.39□□□□□ -1.71
CHD1-208ENST00000512392 IGHV3-13P01766 116 aa4.39□□□□□ -1.71
CHD1-208ENST00000512392 IGKV1-16P04430 117 aa4.39□□□□□ -1.71
CHD1-208ENST00000512392 SPINK8P0C7L1 97 aa4.39□□□□□ -1.71
CHD1-208ENST00000512392 ZNF688P0C7X2 276 aa4.39□□□□□ -1.71
CHD1-208ENST00000512392 CD28P10747 220 aa4.39□□□□□ -1.71
CHD1-208ENST00000512392 NMUP48645 174 aa4.39□□□□□ -1.71
CHD1-208ENST00000512392 RPL30P62888 115 aaKnown RBP4.39□□□□□ -1.71
CHD1-208ENST00000512392 FER1L6Q2WGJ9 1857 aa4.39□□□□□ -1.71
CHD1-208ENST00000512392 RNASE13Q5GAN3 156 aaKnown RBP4.39□□□□□ -1.71
CHD1-208ENST00000512392 C18orf65Q6ZTR6 163 aa4.39□□□□□ -1.71
CHD1-208ENST00000512392 CAMK2N2Q96S95 79 aa4.39□□□□□ -1.71
CHD1-208ENST00000512392 KIAA1671Q9BY89 1806 aa4.39□□□□□ -1.71
CHD1-208ENST00000512392 MAP3K1Q13233 1512 aa4.39□□□□□ -1.71
CHD1-208ENST00000512392 SBF1O95248 1867 aa4.39□□□□□ -1.71
CHD1-208ENST00000512392 PHIPQ8WWQ0 1821 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 IGHV1OR15-9A0A0B4J2B8 117 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 CDC42EP2O14613 210 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 IGLV3-25P01717 112 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 CCL20P78556 96 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 IZUMO2Q6UXV1 221 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 FOXI2Q6ZQN5 318 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 OR10G2Q8NGC3 310 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 SLC25A46Q96AG3 418 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 SNRNP25Q9BV90 132 aaKnown RBP4.38□□□□□ -1.71
CHD1-208ENST00000512392 KDM5DQ9BY66 1539 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 DOCK7Q96N67 2140 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 DOCK4Q8N1I0 1966 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 RGS12O14924 1447 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 SRRM5B3KS81 715 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 SOCS1O15524 211 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 SLC25A5P05141 298 aaKnown RBP4.38□□□□□ -1.71
CHD1-208ENST00000512392 UBE2BP63146 152 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 QRFPP83859 136 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 SPATA12Q7Z6I5 190 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 MIEN1Q9BRT3 115 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 TTTY13Q9BZ97 58 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 C6orf106Q9H6K1 298 aaPredicted RBP4.38□□□□□ -1.71
CHD1-208ENST00000512392 ZNF586Q9NXT0 402 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 COMMD3Q9UBI1 195 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 ZNF835Q9Y2P0 537 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 IER3IP1Q9Y5U9 82 aa4.38□□□□□ -1.71
CHD1-208ENST00000512392 KIAA1551Q9HCM1 1747 aa4.37□□□□□ -1.71
CHD1-208ENST00000512392 HIST1H1DP16402 221 aaKnown RBP4.37□□□□□ -1.71
CHD1-208ENST00000512392 RNASE4P34096 147 aaKnown RBP4.37□□□□□ -1.71
CHD1-208ENST00000512392 CSN1S1P47710 185 aa4.37□□□□□ -1.71
CHD1-208ENST00000512392 ZNF876PQ49A33 203 aa4.37□□□□□ -1.71
CHD1-208ENST00000512392 FAM104BQ5XKR9 115 aa4.37□□□□□ -1.71
CHD1-208ENST00000512392 PHF5AQ7RTV0 110 aaKnown RBP4.37□□□□□ -1.71
CHD1-208ENST00000512392 AAED1Q7RTV5 226 aa4.37□□□□□ -1.71
CHD1-208ENST00000512392 GTSCR1Q86UQ5 136 aa4.37□□□□□ -1.71
CHD1-208ENST00000512392 PCP2Q8IVA1 136 aa4.37□□□□□ -1.71
CHD1-208ENST00000512392 ITLN2Q8WWU7 325 aaPredicted RBP4.37□□□□□ -1.71
CHD1-208ENST00000512392 PHLDA3Q9Y5J5 127 aa4.37□□□□□ -1.71
CHD1-208ENST00000512392 AKAP11Q9UKA4 1901 aa4.37□□□□□ -1.71
CHD1-208ENST00000512392 IGLV3-10A0A075B6K4 115 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 MRPS14O60783 128 aaKnown RBP4.36□□□□□ -1.71
CHD1-208ENST00000512392 KLF7O75840 302 aaPredicted RBP4.36□□□□□ -1.71
CHD1-208ENST00000512392 SERF1AO75920 110 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 DYNLT3P51808 116 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 SNRPD3P62318 126 aaKnown RBP4.36□□□□□ -1.71
CHD1-208ENST00000512392 ZNF101Q8IZC7 436 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 CEND1Q8N111 149 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 RNF182Q8N6D2 247 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 SUMF2Q8NBJ7 301 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 OR10AC1Q8NH08 325 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 LINC01006Q8NI28 216 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 TAS2R8Q9NYW2 309 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 CCDC167Q9P0B6 97 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 EPDR1Q9UM22 224 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 NCAPD3P42695 1498 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 NLRC5Q86WI3 1866 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 CHD4Q14839 1912 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 PNMA8CA0A1B0GUJ8 204 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 HSPB1P04792 205 aaKnown RBP4.36□□□□□ -1.71
CHD1-208ENST00000512392 ZNF19P17023 458 aa4.36□□□□□ -1.71
CHD1-208ENST00000512392 S100A4P26447 101 aaKnown RBP4.36□□□□□ -1.71
CHD1-208ENST00000512392 TMEM258P61165 79 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms