RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 SDF2L1Q9HCN8 221 aa13.16□□□□□ -0.3
CXCL3-204ENST00000511669 MLXQ9UH92 298 aa13.16□□□□□ -0.3
CXCL3-204ENST00000511669 NCBP2LA6PVI3 153 aaKnown RBP13.15□□□□□ -0.3
CXCL3-204ENST00000511669 EIF3GO75821 320 aaKnown RBP eCLIP13.15□□□□□ -0.3
CXCL3-204ENST00000511669 PRB1P04280 392 aa13.15□□□□□ -0.3
CXCL3-204ENST00000511669 C8orf88P0DMB2 117 aa13.15□□□□□ -0.3
CXCL3-204ENST00000511669 MLANAQ16655 118 aa13.15□□□□□ -0.3
CXCL3-204ENST00000511669 ZNF562Q6V9R5 426 aa13.15□□□□□ -0.3
CXCL3-204ENST00000511669 RPUSD4Q96CM3 377 aaKnown RBP13.15□□□□□ -0.3
CXCL3-204ENST00000511669 TBX15Q96SF7 602 aa13.15□□□□□ -0.3
CXCL3-204ENST00000511669 SEPSECSQ9HD40 501 aaKnown RBP13.15□□□□□ -0.3
CXCL3-204ENST00000511669 TNFRSF19Q9NS68 423 aa13.15□□□□□ -0.3
CXCL3-204ENST00000511669 TMEM242Q9NWH2 141 aa13.15□□□□□ -0.3
CXCL3-204ENST00000511669 SCGB2A1O75556 95 aa13.14□□□□□ -0.31
CXCL3-204ENST00000511669 AKR1C3P42330 323 aa13.14□□□□□ -0.31
CXCL3-204ENST00000511669 UBE2G2P60604 165 aa13.14□□□□□ -0.31
CXCL3-204ENST00000511669 RNF212Q495C1 297 aa13.14□□□□□ -0.31
CXCL3-204ENST00000511669 C10orf113Q5VZT2 155 aa13.14□□□□□ -0.31
CXCL3-204ENST00000511669 STXBP6Q8NFX7 210 aa13.14□□□□□ -0.31
CXCL3-204ENST00000511669 SLC25A33Q9BSK2 321 aa13.14□□□□□ -0.31
CXCL3-204ENST00000511669 PARLQ9H300 379 aa13.14□□□□□ -0.31
CXCL3-204ENST00000511669 NPFFO15130 113 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 OR7C2O60412 319 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 FLI1Q01543 452 aaPredicted RBP13.13□□□□□ -0.31
CXCL3-204ENST00000511669 ARPC1AQ92747 370 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 WNT10AQ9GZT5 417 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 COLCA2A8K830 154 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 VWC2LB2RUY7 222 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 FCN1O00602 326 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 FOLR2P14207 255 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 PAX1P15863 534 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 CTRB1P17538 263 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 PAX8Q06710 450 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 CTRB2Q6GPI1 263 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 MIR17HGQ75NE6 70 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 S100A7AQ86SG5 101 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 Q8N6K4 173 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 OR4X1Q8NH49 305 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 PERPQ96FX8 193 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 THYN1Q9P016 225 aa13.13□□□□□ -0.31
CXCL3-204ENST00000511669 NPIPB5A8MRT5 1133 aa13.12□□□□□ -0.31
CXCL3-204ENST00000511669 CLDN34H7C241 214 aa13.12□□□□□ -0.31
CXCL3-204ENST00000511669 SLC25A16P16260 332 aa13.12□□□□□ -0.31
CXCL3-204ENST00000511669 SAA4P35542 130 aa13.12□□□□□ -0.31
CXCL3-204ENST00000511669 ADIRFQ15847 76 aa13.12□□□□□ -0.31
CXCL3-204ENST00000511669 BBC3Q96PG8 261 aaPredicted RBP13.12□□□□□ -0.31
CXCL3-204ENST00000511669 RASL11BQ9BPW5 248 aa13.12□□□□□ -0.31
CXCL3-204ENST00000511669 DOK5Q9P104 306 aa13.12□□□□□ -0.31
CXCL3-204ENST00000511669 RAB5BP61020 215 aa13.11□□□□□ -0.31
CXCL3-204ENST00000511669 SPATA31B1PQ5VZV4 182 aa13.11□□□□□ -0.31
CXCL3-204ENST00000511669 HRNRQ86YZ3 2850 aaPredicted RBP13.1□□□□□ -0.31
CXCL3-204ENST00000511669 ARHGAP32A7KAX9 2087 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 TRAV30A0A087WSZ9 112 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 C1orf196B1AJZ1 125 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 APELAP0DMC3 54 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 GATA2P23769 480 aaPredicted RBP13.1□□□□□ -0.31
CXCL3-204ENST00000511669 ATP5G3P48201 142 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 MFAP2P55001 183 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 HIST1H2BAQ96A08 127 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 ANAPC16Q96DE5 110 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 CACNA1BQ00975 2339 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 IGKV1D-37A0A075B6S9 117 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 IGHV4-61A0A0C4DH41 118 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 A0A1W2PRE2 83 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 GATA3P23771 443 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 CD24P25063 80 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 CX3CL1P78423 397 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 SSBP2P81877 361 aaPredicted RBP13.1□□□□□ -0.31
CXCL3-204ENST00000511669 DYNAPQ8N1N2 210 aa13.1□□□□□ -0.31
CXCL3-204ENST00000511669 LOC105371267A0A1B0GV96 52 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 PSMB11A5LHX3 300 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 I3L2K1 104 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 HYPMO75409 117 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 HLA-DRB1P01911 266 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 HIST1H1BP16401 226 aaKnown RBP13.09□□□□□ -0.31
CXCL3-204ENST00000511669 RAB5AP20339 215 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 S100PP25815 95 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 PLP1P60201 277 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 UBE2L3P68036 154 aaKnown RBP13.09□□□□□ -0.31
CXCL3-204ENST00000511669 ZNF90Q03938 601 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 TTC9CQ8N5M4 171 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 FAM24BQ8N5W8 94 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 OR5AU1Q8NGC0 362 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 TMEM37Q8WXS4 190 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 ISOC2Q96AB3 205 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 TMEM68Q96MH6 324 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 OR5B12Q96R08 314 aa13.09□□□□□ -0.31
CXCL3-204ENST00000511669 IGHV1-69DA0A0B4J2H0 117 aa13.08□□□□□ -0.32
CXCL3-204ENST00000511669 CENPVL3A0A0U1RRI6 287 aa13.08□□□□□ -0.32
CXCL3-204ENST00000511669 PPP1R2P9O14990 202 aa13.08□□□□□ -0.32
CXCL3-204ENST00000511669 TGOLN2O43493 480 aa13.08□□□□□ -0.32
CXCL3-204ENST00000511669 NDUFB4O95168 129 aa13.08□□□□□ -0.32
CXCL3-204ENST00000511669 IGHV1-69P01742 117 aa13.08□□□□□ -0.32
CXCL3-204ENST00000511669 IGHV3-48P01763 117 aa13.08□□□□□ -0.32
CXCL3-204ENST00000511669 RNF224P0DH78 156 aa13.08□□□□□ -0.32
CXCL3-204ENST00000511669 RPL23P62829 140 aaKnown RBP13.08□□□□□ -0.32
CXCL3-204ENST00000511669 OR51G1Q8NGK1 321 aa13.08□□□□□ -0.32
CXCL3-204ENST00000511669 C11orf52Q96A22 123 aa13.08□□□□□ -0.32
CXCL3-204ENST00000511669 RBM14Q96PK6 669 aaKnown RBP13.08□□□□□ -0.32
CXCL3-204ENST00000511669 TCEAL7Q9BRU2 100 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms