RNA–Protein interactions for RNA: ENST00000511313.5

POLR2J3-215, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best) BASIC

Gene POLR2J3, Length 4,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-215ENST00000511313 C16orf54Q6UWD8 224 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 PCNX1Q96RV3 2341 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 CXorf65A6NEN9 183 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 M6PRP20645 277 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 SYNJ2BPP57105 145 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 LYPD1Q8N2G4 141 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 ZNF383Q8NA42 475 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 OR5C1Q8NGR4 320 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 RCHY1Q96PM5 261 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 SDF2L1Q9HCN8 221 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 PUS1Q9Y606 427 aaKnown RBP eCLIP7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 RFNGQ9Y644 331 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 HIST1H1AQ02539 215 aaPredicted RBP7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 DGAT2L7PQ6IED9 249 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 ZNF841Q6ZN19 808 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 Q6ZSV7 163 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 LRTM2Q8N967 370 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 SLC25A38Q96DW6 304 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 PRADC1Q9BSG0 188 aa7.72□□□□□ -1.17
POLR2J3-215ENST00000511313 IGKV3-7A0A075B6H7 116 aa7.71□□□□□ -1.17
POLR2J3-215ENST00000511313 NDUFA3O95167 84 aa7.71□□□□□ -1.17
POLR2J3-215ENST00000511313 ZNF329Q86UD4 541 aa7.71□□□□□ -1.17
POLR2J3-215ENST00000511313 OR9G4Q8NGQ1 327 aa7.71□□□□□ -1.17
POLR2J3-215ENST00000511313 ASCL2Q99929 193 aa7.71□□□□□ -1.17
POLR2J3-215ENST00000511313 NOTCH2Q04721 2471 aa7.71□□□□□ -1.17
POLR2J3-215ENST00000511313 ISLRO14498 428 aa7.71□□□□□ -1.18
POLR2J3-215ENST00000511313 TCTEX1D4Q5JR98 221 aa7.71□□□□□ -1.18
POLR2J3-215ENST00000511313 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.71□□□□□ -1.18
POLR2J3-215ENST00000511313 RHPN1-AS1Q9BWJ2 59 aa7.71□□□□□ -1.18
POLR2J3-215ENST00000511313 MED9Q9NWA0 146 aa7.71□□□□□ -1.18
POLR2J3-215ENST00000511313 IL36RNQ9UBH0 155 aa7.71□□□□□ -1.18
POLR2J3-215ENST00000511313 DOCK7Q96N67 2140 aa7.71□□□□□ -1.18
POLR2J3-215ENST00000511313 MT-ND4LP03901 98 aa7.71□□□□□ -1.18
POLR2J3-215ENST00000511313 ZNF415Q09FC8 603 aa7.71□□□□□ -1.18
POLR2J3-215ENST00000511313 C11orf87Q6NUJ2 197 aa7.71□□□□□ -1.18
POLR2J3-215ENST00000511313 ZNF493Q6ZR52 646 aa7.71□□□□□ -1.18
POLR2J3-215ENST00000511313 ZNF705EA8MWA4 302 aaPredicted RBP7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 LGALS9O00182 355 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 PAX6P26367 422 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 SMUG1Q53HV7 270 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 HIST1H2BAQ96A08 127 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 PSMG3Q9BT73 122 aaPredicted RBP7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 PDE6DO43924 150 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 MGST1P10620 155 aaKnown RBP7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 HABP2Q14520 560 aaPredicted RBP7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 KRTAP21-3Q3LHN1 58 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 TMED6Q8WW62 240 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 RSG1Q9BU20 258 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 SLIRPQ9GZT3 109 aaKnown RBP7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 NXF2Q9GZY0 626 aaKnown RBP7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 OR51M1Q9H341 326 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 ZNF331Q9NQX6 463 aaPredicted RBP7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 DOPEY2Q9Y3R5 2298 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 PGPA6NDG6 321 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 SNCGO76070 127 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 NXPH3O95157 252 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 SSX7Q7RTT5 188 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 RNF167Q9H6Y7 350 aa7.7□□□□□ -1.18
POLR2J3-215ENST00000511313 PDE6HQ13956 83 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 FAM74A3Q4VXF1 159 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 Q8N7P7 452 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 CHAC2Q8WUX2 184 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 SFT2D1Q8WV19 159 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 GSX1Q9H4S2 264 aaPredicted RBP7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 C5orf66Q9H5L9 145 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 MLXQ9UH92 298 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 RUNX1Q01196 453 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 NMSQ5H8A3 153 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 FAM90A2PQ658T7 463 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 RNF144BQ7Z419 303 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 LYZL2Q7Z4W2 148 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 PPP1R1CQ8WVI7 109 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 C20orf144Q9BQM9 153 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 DCAF16Q9NXF7 216 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 DOK5Q9P104 306 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 TRGV2A0A075B6R0 118 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 TRAV21A0A0B4J279 112 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 F5H697 171 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 M0R036 132 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 CST7O76096 145 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 RIGQ13278 110 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 TNRC6AQ8NDV7 1962 aaKnown RBP7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 WISP2O76076 250 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 OR2C1O95371 312 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 HOXD3P31249 432 aaPredicted RBP7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 HAPLN4Q86UW8 402 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 BAP18Q8IXM2 172 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 C5orf17Q8NAS9 161 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 LINC01006Q8NI28 216 aa7.69□□□□□ -1.18
POLR2J3-215ENST00000511313 CEP350Q5VT06 3117 aa7.68□□□□□ -1.18
POLR2J3-215ENST00000511313 IGHV7-4-1A0A0J9YVY3 117 aa7.68□□□□□ -1.18
POLR2J3-215ENST00000511313 CHEK1O14757 476 aa7.68□□□□□ -1.18
POLR2J3-215ENST00000511313 ATP6V1G1O75348 118 aa7.68□□□□□ -1.18
POLR2J3-215ENST00000511313 TUSC1Q2TAM9 212 aa7.68□□□□□ -1.18
POLR2J3-215ENST00000511313 PAPPA-AS1Q5QFB9 102 aa7.68□□□□□ -1.18
POLR2J3-215ENST00000511313 HSPB7Q9UBY9 170 aa7.68□□□□□ -1.18
POLR2J3-215ENST00000511313 CHD8Q9HCK8 2581 aa7.68□□□□□ -1.18
POLR2J3-215ENST00000511313 SMIM9A6NGZ8 99 aa7.68□□□□□ -1.18
POLR2J3-215ENST00000511313 H3BP45 60 aa7.68□□□□□ -1.18
POLR2J3-215ENST00000511313 APELAP0DMC3 54 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms