RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 RTL8CO15255 209 aa11.46□□□□□ -0.57
RAB40C-202ENST00000509637 ZNF688P0C7X2 276 aa11.46□□□□□ -0.57
RAB40C-202ENST00000509637 CRYBB3P26998 211 aa11.46□□□□□ -0.57
RAB40C-202ENST00000509637 RPL11P62913 178 aaKnown RBP11.46□□□□□ -0.57
RAB40C-202ENST00000509637 PAFAH1B2P68402 229 aa11.46□□□□□ -0.57
RAB40C-202ENST00000509637 ERHP84090 104 aaKnown RBP11.46□□□□□ -0.57
RAB40C-202ENST00000509637 C12orf74Q32Q52 190 aa11.46□□□□□ -0.57
RAB40C-202ENST00000509637 GINS3Q9BRX5 216 aa11.46□□□□□ -0.57
RAB40C-202ENST00000509637 Q9H521 79 aa11.46□□□□□ -0.57
RAB40C-202ENST00000509637 MUC4Q99102 2169 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 RYR1P21817 5038 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 TMEM127O75204 238 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 P2RY1P47900 373 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 NPBWR1P48145 328 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 TCTAP57738 103 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 TSPAN5P62079 268 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 BSXQ3C1V8 233 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 SP6Q3SY56 376 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 TIGITQ495A1 244 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 GSG1LQ6UXU4 331 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 LHFPL1Q86WI0 220 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 SNX29P2Q8IUI4 249 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 STHQ8IWL8 128 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 STXBP6Q8NFX7 210 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 KRTAP4-5Q9BYR2 181 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 DNAH11Q96DT5 4516 aa11.45□□□□□ -0.58
RAB40C-202ENST00000509637 CLN5O75503 358 aa11.44□□□□□ -0.58
RAB40C-202ENST00000509637 NXPH3O95157 252 aa11.44□□□□□ -0.58
RAB40C-202ENST00000509637 ELK1P19419 428 aa11.44□□□□□ -0.58
RAB40C-202ENST00000509637 NPPCP23582 126 aa11.44□□□□□ -0.58
RAB40C-202ENST00000509637 RND3P61587 244 aa11.44□□□□□ -0.58
RAB40C-202ENST00000509637 TMEM170AQ8WVE7 144 aa11.44□□□□□ -0.58
RAB40C-202ENST00000509637 COMMD3Q9UBI1 195 aa11.44□□□□□ -0.58
RAB40C-202ENST00000509637 C11orf94C9JXX5 98 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 CD5P06127 495 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 MIFP14174 115 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 DEFB1P60022 68 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 NCS1P62166 190 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 KCTD21Q4G0X4 260 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 RNASE12Q5GAN4 147 aaKnown RBP11.43□□□□□ -0.58
RAB40C-202ENST00000509637 ACTL10Q5JWF8 245 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 LPCAT3Q6P1A2 487 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 OR4D10Q8NGI6 311 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 OR4X1Q8NH49 305 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 GLMPQ8WWB7 406 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 GRAMD2BQ96HH9 432 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 RAB40CQ96S21 281 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 KLK11Q9UBX7 282 aa11.43□□□□□ -0.58
RAB40C-202ENST00000509637 PKD1P98161 4303 aa11.42□□□□□ -0.58
RAB40C-202ENST00000509637 TRAV10A0A0B4J240 114 aa11.42□□□□□ -0.58
RAB40C-202ENST00000509637 HPGDSO60760 199 aa11.42□□□□□ -0.58
RAB40C-202ENST00000509637 PIGPP57054 158 aa11.42□□□□□ -0.58
RAB40C-202ENST00000509637 CROCCP3Q8IVE0 287 aa11.42□□□□□ -0.58
RAB40C-202ENST00000509637 LHFPL5Q8TAF8 219 aa11.42□□□□□ -0.58
RAB40C-202ENST00000509637 M0R2N4 97 aa11.41□□□□□ -0.58
RAB40C-202ENST00000509637 APOA1P02647 267 aa11.41□□□□□ -0.58
RAB40C-202ENST00000509637 RCVRNP35243 200 aa11.41□□□□□ -0.58
RAB40C-202ENST00000509637 MORN3Q6PF18 240 aaPredicted RBP11.41□□□□□ -0.58
RAB40C-202ENST00000509637 C16orf54Q6UWD8 224 aa11.41□□□□□ -0.58
RAB40C-202ENST00000509637 RNF126Q9BV68 326 aa11.41□□□□□ -0.58
RAB40C-202ENST00000509637 SCPEP1Q9HB40 452 aa11.41□□□□□ -0.58
RAB40C-202ENST00000509637 IFNA17P01571 189 aa11.4□□□□□ -0.58
RAB40C-202ENST00000509637 CD3DP04234 171 aa11.4□□□□□ -0.58
RAB40C-202ENST00000509637 IGLC1P0CG04 106 aa11.4□□□□□ -0.58
RAB40C-202ENST00000509637 SPP1P10451 314 aa11.4□□□□□ -0.58
RAB40C-202ENST00000509637 SNCAP37840 140 aa11.4□□□□□ -0.58
RAB40C-202ENST00000509637 RPL5P46777 297 aaKnown RBP11.4□□□□□ -0.58
RAB40C-202ENST00000509637 USF2Q15853 346 aaPredicted RBP11.4□□□□□ -0.58
RAB40C-202ENST00000509637 SLC35G3Q8N808 338 aa11.4□□□□□ -0.58
RAB40C-202ENST00000509637 OR52I2Q8NH67 350 aa11.4□□□□□ -0.58
RAB40C-202ENST00000509637 PLA2G2EQ9NZK7 142 aa11.4□□□□□ -0.58
RAB40C-202ENST00000509637 TBC1D24Q9ULP9 559 aa11.4□□□□□ -0.58
RAB40C-202ENST00000509637 C3orf85A0A1B0GTC6 90 aa11.39□□□□□ -0.59
RAB40C-202ENST00000509637 PGAM2P15259 253 aa11.39□□□□□ -0.59
RAB40C-202ENST00000509637 UCP1P25874 307 aa11.39□□□□□ -0.59
RAB40C-202ENST00000509637 VBP1P61758 197 aa11.39□□□□□ -0.59
RAB40C-202ENST00000509637 AARDQ4LEZ3 155 aa11.39□□□□□ -0.59
RAB40C-202ENST00000509637 PSMG4Q5JS54 123 aa11.39□□□□□ -0.59
RAB40C-202ENST00000509637 GDF5OSQ5U4N7 250 aa11.39□□□□□ -0.59
RAB40C-202ENST00000509637 PRSS54Q6PEW0 395 aa11.39□□□□□ -0.59
RAB40C-202ENST00000509637 TMEM230Q96A57 120 aa11.39□□□□□ -0.59
RAB40C-202ENST00000509637 METTL26Q96S19 204 aa11.39□□□□□ -0.59
RAB40C-202ENST00000509637 ABHD1Q96SE0 405 aa11.39□□□□□ -0.59
RAB40C-202ENST00000509637 XCL2Q9UBD3 114 aa11.39□□□□□ -0.59
RAB40C-202ENST00000509637 DEFB131BA0A096LNP1 70 aa11.38□□□□□ -0.59
RAB40C-202ENST00000509637 A0A1W2PS18 150 aa11.38□□□□□ -0.59
RAB40C-202ENST00000509637 H3BMM0 161 aa11.38□□□□□ -0.59
RAB40C-202ENST00000509637 AMBPP02760 352 aa11.38□□□□□ -0.59
RAB40C-202ENST00000509637 OPRK1P41145 380 aa11.38□□□□□ -0.59
RAB40C-202ENST00000509637 DHODHQ02127 395 aa11.38□□□□□ -0.59
RAB40C-202ENST00000509637 DHRS2Q13268 280 aa11.38□□□□□ -0.59
RAB40C-202ENST00000509637 POM121L12Q8N7R1 296 aa11.38□□□□□ -0.59
RAB40C-202ENST00000509637 FAM90A26D6RGX4 464 aa11.37□□□□□ -0.59
RAB40C-202ENST00000509637 S100GP29377 79 aa11.37□□□□□ -0.59
RAB40C-202ENST00000509637 HOXA1P49639 335 aaPredicted RBP11.37□□□□□ -0.59
RAB40C-202ENST00000509637 RND2P52198 227 aa11.37□□□□□ -0.59
RAB40C-202ENST00000509637 AKR1C2P52895 323 aa11.37□□□□□ -0.59
RAB40C-202ENST00000509637 LINC00336Q6ZUF6 198 aa11.37□□□□□ -0.59
RAB40C-202ENST00000509637 OR13C8Q8NGS7 320 aa11.37□□□□□ -0.59
RAB40C-202ENST00000509637 GLYATL2Q8WU03 294 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms