RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 CMTM1Q8IZ96 169 aa11.52□□□□□ -0.57
CXCL1-202ENST00000509101 NDUFAF3Q9BU61 184 aa11.52□□□□□ -0.57
CXCL1-202ENST00000509101 A0A1B0GU03 582 aa11.51□□□□□ -0.57
CXCL1-202ENST00000509101 NPBWR1P48145 328 aa11.51□□□□□ -0.57
CXCL1-202ENST00000509101 PRCDQ00LT1 54 aa11.51□□□□□ -0.57
CXCL1-202ENST00000509101 ACTL10Q5JWF8 245 aa11.51□□□□□ -0.57
CXCL1-202ENST00000509101 SAMD12Q8N8I0 201 aa11.51□□□□□ -0.57
CXCL1-202ENST00000509101 OR4A16Q8NH70 328 aa11.51□□□□□ -0.57
CXCL1-202ENST00000509101 GRAMD2BQ96HH9 432 aa11.51□□□□□ -0.57
CXCL1-202ENST00000509101 DIABLOQ9NR28 239 aa11.51□□□□□ -0.57
CXCL1-202ENST00000509101 IGLV2-18A0A075B6J9 118 aa11.5□□□□□ -0.57
CXCL1-202ENST00000509101 GPR31O00270 319 aa11.5□□□□□ -0.57
CXCL1-202ENST00000509101 PMP2P02689 132 aa11.5□□□□□ -0.57
CXCL1-202ENST00000509101 LGALS9BQ3B8N2 356 aa11.5□□□□□ -0.57
CXCL1-202ENST00000509101 PHLDA2Q53GA4 152 aa11.5□□□□□ -0.57
CXCL1-202ENST00000509101 SPINK9Q5DT21 86 aa11.5□□□□□ -0.57
CXCL1-202ENST00000509101 UBE2NLQ5JXB2 153 aa11.5□□□□□ -0.57
CXCL1-202ENST00000509101 CSNK1G2-AS1Q8NCQ2 148 aa11.5□□□□□ -0.57
CXCL1-202ENST00000509101 COMMD3Q9UBI1 195 aa11.5□□□□□ -0.57
CXCL1-202ENST00000509101 NACAE9PAV3 2078 aa11.49□□□□□ -0.57
CXCL1-202ENST00000509101 P2RY1P47900 373 aa11.49□□□□□ -0.57
CXCL1-202ENST00000509101 DHRS11Q6UWP2 260 aa11.49□□□□□ -0.57
CXCL1-202ENST00000509101 H2BFWTQ7Z2G1 175 aa11.49□□□□□ -0.57
CXCL1-202ENST00000509101 GPR141Q7Z602 305 aa11.49□□□□□ -0.57
CXCL1-202ENST00000509101 UBE2DNLQ8IWF7 75 aa11.49□□□□□ -0.57
CXCL1-202ENST00000509101 S100A16Q96FQ6 103 aaKnown RBP11.49□□□□□ -0.57
CXCL1-202ENST00000509101 SEC22AQ96IW7 307 aa11.49□□□□□ -0.57
CXCL1-202ENST00000509101 A0A1W2PS18 150 aa11.48□□□□□ -0.57
CXCL1-202ENST00000509101 IGKV1-39P01597 117 aa11.48□□□□□ -0.57
CXCL1-202ENST00000509101 IGKV1D-39P04432 117 aa11.48□□□□□ -0.57
CXCL1-202ENST00000509101 NPPCP23582 126 aa11.48□□□□□ -0.57
CXCL1-202ENST00000509101 PPP5CP53041 499 aa11.48□□□□□ -0.57
CXCL1-202ENST00000509101 TAS2R20P59543 309 aa11.48□□□□□ -0.57
CXCL1-202ENST00000509101 ERHP84090 104 aaKnown RBP11.48□□□□□ -0.57
CXCL1-202ENST00000509101 OR5H2Q8NGV7 314 aa11.48□□□□□ -0.57
CXCL1-202ENST00000509101 DCANP1Q8TF63 244 aa11.48□□□□□ -0.57
CXCL1-202ENST00000509101 MRGPRFQ96AM1 343 aa11.48□□□□□ -0.57
CXCL1-202ENST00000509101 METTL26Q96S19 204 aa11.48□□□□□ -0.57
CXCL1-202ENST00000509101 PLA2G2EQ9NZK7 142 aa11.48□□□□□ -0.57
CXCL1-202ENST00000509101 HPGDSO60760 199 aa11.47□□□□□ -0.57
CXCL1-202ENST00000509101 TMEM50AO95807 157 aa11.47□□□□□ -0.57
CXCL1-202ENST00000509101 IFNA10P01566 189 aa11.47□□□□□ -0.57
CXCL1-202ENST00000509101 ELK1P19419 428 aa11.47□□□□□ -0.57
CXCL1-202ENST00000509101 RORCP51449 518 aa11.47□□□□□ -0.57
CXCL1-202ENST00000509101 HSPE1P61604 102 aaKnown RBP11.47□□□□□ -0.57
CXCL1-202ENST00000509101 SPCS2Q15005 226 aa11.47□□□□□ -0.57
CXCL1-202ENST00000509101 TBC1D26Q86UD7 250 aa11.47□□□□□ -0.57
CXCL1-202ENST00000509101 CLVS1Q8IUQ0 354 aaPredicted RBP11.47□□□□□ -0.57
CXCL1-202ENST00000509101 ANAPC10Q9UM13 185 aa11.47□□□□□ -0.57
CXCL1-202ENST00000509101 NPY1RP25929 384 aa11.46□□□□□ -0.57
CXCL1-202ENST00000509101 CRYBB3P26998 211 aa11.46□□□□□ -0.57
CXCL1-202ENST00000509101 TAS2R46P59540 309 aa11.46□□□□□ -0.57
CXCL1-202ENST00000509101 IZUMO4Q1ZYL8 232 aa11.46□□□□□ -0.57
CXCL1-202ENST00000509101 PSMG4Q5JS54 123 aa11.46□□□□□ -0.57
CXCL1-202ENST00000509101 TMEM69Q5SWH9 247 aa11.46□□□□□ -0.57
CXCL1-202ENST00000509101 Q6ZR54 194 aa11.46□□□□□ -0.57
CXCL1-202ENST00000509101 OR6F1Q8NGZ6 308 aa11.46□□□□□ -0.57
CXCL1-202ENST00000509101 MRPL36Q9P0J6 103 aaKnown RBP11.46□□□□□ -0.57
CXCL1-202ENST00000509101 IFNA21P01568 189 aa11.45□□□□□ -0.58
CXCL1-202ENST00000509101 IFNA17P01571 189 aa11.45□□□□□ -0.58
CXCL1-202ENST00000509101 CD74P04233 296 aa11.45□□□□□ -0.58
CXCL1-202ENST00000509101 S100GP29377 79 aa11.45□□□□□ -0.58
CXCL1-202ENST00000509101 SNCAP37840 140 aa11.45□□□□□ -0.58
CXCL1-202ENST00000509101 DHRS2Q13268 280 aa11.45□□□□□ -0.58
CXCL1-202ENST00000509101 Q6ZRM9 215 aa11.45□□□□□ -0.58
CXCL1-202ENST00000509101 SLC35G3Q8N808 338 aa11.45□□□□□ -0.58
CXCL1-202ENST00000509101 NARS2Q96I59 477 aaKnown RBP11.45□□□□□ -0.58
CXCL1-202ENST00000509101 RAB40CQ96S21 281 aa11.45□□□□□ -0.58
CXCL1-202ENST00000509101 FAM212BQ9NTI7 297 aaPredicted RBP11.45□□□□□ -0.58
CXCL1-202ENST00000509101 XCL2Q9UBD3 114 aa11.45□□□□□ -0.58
CXCL1-202ENST00000509101 HELTA6NFD8 242 aa11.44□□□□□ -0.58
CXCL1-202ENST00000509101 APOA1P02647 267 aa11.44□□□□□ -0.58
CXCL1-202ENST00000509101 ZNF182P17025 639 aaPredicted RBP11.44□□□□□ -0.58
CXCL1-202ENST00000509101 HRH1P35367 487 aa11.44□□□□□ -0.58
CXCL1-202ENST00000509101 SOHLH1Q5JUK2 328 aa11.44□□□□□ -0.58
CXCL1-202ENST00000509101 TMEM230Q96A57 120 aa11.44□□□□□ -0.58
CXCL1-202ENST00000509101 C1QTNF4Q9BXJ3 329 aa11.44□□□□□ -0.58
CXCL1-202ENST00000509101 LRP1BQ9NZR2 4599 aa11.43□□□□□ -0.58
CXCL1-202ENST00000509101 CLN5O75503 358 aa11.43□□□□□ -0.58
CXCL1-202ENST00000509101 RNASE2P10153 161 aaKnown RBP11.43□□□□□ -0.58
CXCL1-202ENST00000509101 NAT1P18440 290 aa11.43□□□□□ -0.58
CXCL1-202ENST00000509101 HLA-DMAP28067 261 aa11.43□□□□□ -0.58
CXCL1-202ENST00000509101 PRSS3P35030 304 aa11.43□□□□□ -0.58
CXCL1-202ENST00000509101 OPRK1P41145 380 aa11.43□□□□□ -0.58
CXCL1-202ENST00000509101 RPL5P46777 297 aaKnown RBP11.43□□□□□ -0.58
CXCL1-202ENST00000509101 EMP1P54849 157 aa11.43□□□□□ -0.58
CXCL1-202ENST00000509101 FNDC4Q9H6D8 234 aaPredicted RBP11.43□□□□□ -0.58
CXCL1-202ENST00000509101 CORTO00230 105 aa11.42□□□□□ -0.58
CXCL1-202ENST00000509101 EIF2B2P49770 351 aaKnown RBP11.42□□□□□ -0.58
CXCL1-202ENST00000509101 NUTF2P61970 127 aaKnown RBP11.42□□□□□ -0.58
CXCL1-202ENST00000509101 TSPAN5P62079 268 aa11.42□□□□□ -0.58
CXCL1-202ENST00000509101 TIGITQ495A1 244 aa11.42□□□□□ -0.58
CXCL1-202ENST00000509101 MZT2AQ6P582 158 aa11.42□□□□□ -0.58
CXCL1-202ENST00000509101 SNX29P2Q8IUI4 249 aa11.42□□□□□ -0.58
CXCL1-202ENST00000509101 GPX8Q8TED1 209 aa11.42□□□□□ -0.58
CXCL1-202ENST00000509101 MIXL1Q9H2W2 232 aa11.42□□□□□ -0.58
CXCL1-202ENST00000509101 FAM25AB3EWG3 89 aa11.41□□□□□ -0.58
CXCL1-202ENST00000509101 FAM25CB3EWG5 89 aa11.41□□□□□ -0.58
CXCL1-202ENST00000509101 FAM25GB3EWG6 89 aa11.41□□□□□ -0.58
CXCL1-202ENST00000509101 SCGB2A1O75556 95 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms