RNA–Protein interactions for RNA: ENST00000508597.1

HMGB1P44-201, Transcript of high mobility group box 1 pseudogene 44, humanhuman

BASIC

Gene HMGB1P44, Length 572 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P44-201ENST00000508597 ANKRD55Q3KP44 614 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 CFAP161Q6P656 301 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 UNQ5815/PRO19632Q6UWF5 114 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 C12orf54Q6X4T0 127 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 LYZL2Q7Z4W2 148 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 NOXA1Q86UR1 476 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 KLHDC1Q8N7A1 406 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 LFNGQ8NES3 379 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 MPLKIPQ8TAP9 179 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 ASB13Q8WXK3 278 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 GPR146Q96CH1 333 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 CLCC1Q96S66 551 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 SLA2Q9H6Q3 261 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 ENY2Q9NPA8 101 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 THYN1Q9P016 225 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 CACNG5Q9UF02 275 aa4.28□□□□□ -1.72
HMGB1P44-201ENST00000508597 FBN1P35555 2871 aaKnown RBP4.28□□□□□ -1.73
HMGB1P44-201ENST00000508597 TRAV3A0A0B4J244 114 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 A0A0G2JLM5 398 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 A0A0G2JRQ6 117 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 CORTO00230 105 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 ST8SIA3O43173 380 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 PAGE4O60829 102 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 PITX3O75364 302 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 IFNA17P01571 189 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 CTRB1P17538 263 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 PSMB8P28062 276 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 PSMB6P28072 239 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 SUB1P53999 127 aaKnown RBP eCLIP4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 NDPQ00604 133 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 TATDN3Q17R31 274 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 CXorf66Q5JRM2 361 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 GGNBP1Q5YKI7 109 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 CTRB2Q6GPI1 263 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 GSG1LQ6UXU4 331 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 C3orf56Q8N813 242 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 NRACQ8N912 160 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 ZNF114Q8NC26 417 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 OR5AU1Q8NGC0 362 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 OR52B4Q8NGK2 314 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 OR1S1Q8NH92 325 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 SPATA3Q8NHX4 192 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 GRPEL2Q8TAA5 225 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 RNF183Q96D59 192 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 USMG5Q96IX5 58 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 CIB3Q96Q77 187 aaPredicted RBP4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 ATP6V0BQ99437 205 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 HIPK2Q9H2X6 1198 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 MAP6D1Q9H9H5 199 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 PLEKHA3Q9HB20 300 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 U3KQ87 197 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 WNK1Q9H4A3 2382 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 ANK2Q01484 3957 aa4.27□□□□□ -1.73
HMGB1P44-201ENST00000508597 TENM1Q9UKZ4 2725 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 TRBV9A0A0B4J1U6 114 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 IGLC7A0M8Q6 106 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 FAM223BA6NKX1 122 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 E7EUB6 86 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 G3V318 75 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 WRBO00258 174 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 SSNA1O43805 119 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 OR13C7P0DN81 318 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 EDN2P20800 178 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 SNCAP37840 140 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 HTR2BP41595 481 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 NKX2-1P43699 371 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 CDX1P47902 265 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 RAB9AP51151 201 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 TAS2R30P59541 319 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 TNFRSF9Q07011 255 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 ECSCRQ19T08 205 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 IAH1Q2TAA2 248 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 NDUFA11Q86Y39 141 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 FAM223AQ8IWN6 122 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 UXS1Q8NBZ7 420 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 NECAP1Q8NC96 275 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 OR1P1Q8NH06 330 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 PRSS3P2Q8NHM4 247 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 MYOZ3Q8TDC0 251 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 CXorf58Q96LI9 332 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 UBE2E2Q96LR5 201 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 C2orf50Q96LR7 162 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 NOL4LQ96MY1 436 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 CITED1Q99966 193 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 SEC22CQ9BRL7 303 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 FAM103A1Q9BTL3 118 aaKnown RBP4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 NMES1Q9C002 83 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 NSG2Q9Y328 171 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 FBXO7Q9Y3I1 522 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 TSSC4Q9Y5U2 329 aaPredicted RBP4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 F11RQ9Y624 299 aaKnown RBP4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 WSB1Q9Y6I7 421 aa4.26□□□□□ -1.73
HMGB1P44-201ENST00000508597 C13orf42A0A1B0GVH6 325 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 A0A1B0GW64 132 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 TCRBV4S1A1TA0A5B7 111 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 C5orf51A6NDU8 294 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 CEBPZOSA8MTT3 80 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 USP17L23D6RBM5 183 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 SYNGR2O43760 224 aa4.25□□□□□ -1.73
HMGB1P44-201ENST00000508597 ADAP1O75689 374 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms