RNA–Protein interactions for RNA: ENST00000506924.1

CLCN3-205, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 4

Gene CLCN3, Length 567 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-205ENST00000506924 BMPR1BO00238 502 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 LYRM1O43325 122 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 SAP30O75446 220 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 NDUFB6O95139 128 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 IGHV3-48P01763 117 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 FGF2P09038 288 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 ANXA3P12429 323 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 HIST1H1BP16401 226 aaKnown RBP7.24□□□□□ -1.25
CLCN3-205ENST00000506924 ANXA7P20073 488 aaKnown RBP7.24□□□□□ -1.25
CLCN3-205ENST00000506924 SYNJ2BPP57105 145 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 PRCDQ00LT1 54 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 RPEL1Q2QD12 228 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 KRTAP15-1Q3LI76 137 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 TMEM128Q5BJH2 165 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 LGI3Q8N145 548 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 DEDD2Q8WXF8 326 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 EEF1AKMT3Q96AZ1 226 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 GALNT14Q96FL9 552 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 SRSF8Q9BRL6 282 aaKnown RBP7.24□□□□□ -1.25
CLCN3-205ENST00000506924 PDCD10Q9BUL8 212 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 MCRIP2Q9BUT9 160 aaKnown RBP7.24□□□□□ -1.25
CLCN3-205ENST00000506924 PLEKHA3Q9HB20 300 aa7.24□□□□□ -1.25
CLCN3-205ENST00000506924 GAR1Q9NY12 217 aaKnown RBP7.24□□□□□ -1.25
CLCN3-205ENST00000506924 F11RQ9Y624 299 aaKnown RBP7.24□□□□□ -1.25
CLCN3-205ENST00000506924 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.23□□□□□ -1.25
CLCN3-205ENST00000506924 IGHV3-35A0A0C4DH35 117 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 SPRY2O43597 315 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 OR2C1O95371 312 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 SFT2D2O95562 160 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 DUS4LO95620 317 aaKnown RBP7.23□□□□□ -1.25
CLCN3-205ENST00000506924 CLEC3BP05452 202 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 ZP3P21754 424 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 ARL3P36405 182 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 HOXA1P49639 335 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-205ENST00000506924 ZNF846Q147U1 533 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 KPRPQ5T749 579 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-205ENST00000506924 C9orf66Q5T8R8 295 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 THOC7Q6I9Y2 204 aaKnown RBP7.23□□□□□ -1.25
CLCN3-205ENST00000506924 HSD17B13Q7Z5P4 300 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-205ENST00000506924 ZNF429Q86V71 674 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 FAM219AQ8IW50 185 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 UBAC2Q8NBM4 344 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 S100ZQ8WXG8 99 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 PINX1Q96BK5 328 aaKnown RBP7.23□□□□□ -1.25
CLCN3-205ENST00000506924 CCDC32Q9BV29 185 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 ENY2Q9NPA8 101 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.23□□□□□ -1.25
CLCN3-205ENST00000506924 SELENOKQ9Y6D0 94 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 COX11Q9Y6N1 276 aa7.23□□□□□ -1.25
CLCN3-205ENST00000506924 TRAV6A0A075B6T7 132 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 A0A0B4J2A0 478 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 WI2-2373I1.2A0A1W2PRP0 233 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 OR2T8A6NH00 312 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 CEBPZOSA8MTT3 80 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 HOXB5P09067 269 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 SULT1A3P0DMM9 295 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 SULT1A4P0DMN0 295 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 EDN2P20800 178 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 GPR183P32249 361 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 SNCAP37840 140 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 ERHP84090 104 aaKnown RBP7.22□□□□□ -1.25
CLCN3-205ENST00000506924 KLF5Q13887 457 aaPredicted RBP7.22□□□□□ -1.25
CLCN3-205ENST00000506924 ACSM6Q6P461 480 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 OR52B4Q8NGK2 314 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 IL22RA2Q969J5 263 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 C7orf50Q9BRJ6 194 aaKnown RBP7.22□□□□□ -1.25
CLCN3-205ENST00000506924 THYN1Q9P016 225 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 SHPKQ9UHJ6 478 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 TBC1D24Q9ULP9 559 aa7.22□□□□□ -1.25
CLCN3-205ENST00000506924 TRBV7-1A0A0A6YYK4 115 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 C9orf170A2RU37 121 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 K7EIM0 57 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 CYB5BO43169 146 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 ADAP1O75689 374 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 NUDT3O95989 172 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 MT-CO2P00403 227 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 TCRBP04435 133 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 HNRNPCP07910 306 aaKnown RBP eCLIP7.21□□□□□ -1.26
CLCN3-205ENST00000506924 OR4E1P0C645 316 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 SPCS3P61009 180 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 UBE2MP61081 183 aaKnown RBP7.21□□□□□ -1.26
CLCN3-205ENST00000506924 SRPXP78539 464 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 IFITM3Q01628 133 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 SMCO1Q147U7 214 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 KLK9Q2XQG4 91 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 Q56UQ5 140 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 NMSQ5H8A3 153 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 SUMO4Q6EEV6 95 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 LINC00299Q6ZSB3 139 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 OR9G4Q8NGQ1 327 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 OR1P1Q8NH06 330 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 OR1S1Q8NH92 325 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 ZNF502Q8TBZ5 544 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 SCARB1Q8WTV0 552 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 CXorf58Q96LI9 332 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 GPR61Q9BZJ8 451 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 C20orf85Q9H1P6 137 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 KLK9Q9UKQ9 250 aa7.21□□□□□ -1.26
CLCN3-205ENST00000506924 IGHV3OR16-8A0A075B7F1 116 aa7.2□□□□□ -1.26
CLCN3-205ENST00000506924 ZNF320A2RRD8 509 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms