RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 USE1Q9NZ43 259 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 RAB22AQ9UL26 194 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 MPC1Q9Y5U8 109 aa3.16□□□□□ -1.9
HERC4-213ENST00000506515 FUOMA2VDF0 154 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 OOSP1A8MZH6 123 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 F5H5K5 113 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 OR7C2O60412 319 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 E2F6O75461 281 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 OR5F1O95221 314 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 BPGMP07738 259 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 TSPAN19P0C672 248 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 GPX2P18283 190 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 PAX6P26367 422 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 TGFBR1P36897 503 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 POLR2JP52435 117 aaKnown RBP3.15□□□□□ -1.91
HERC4-213ENST00000506515 BLVRAP53004 296 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 TAS2R41P59536 307 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 TAS2R60P59551 318 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 KRTAP10-10P60014 251 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 MRPS25P82663 173 aaKnown RBP3.15□□□□□ -1.91
HERC4-213ENST00000506515 HOXC5Q00444 222 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 SPRNQ5BIV9 151 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 DRAM2Q6UX65 266 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 CROCCP2Q86T23 111 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 PDPNQ86YL7 162 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 ASCC1Q8N9N2 400 aaKnown RBP3.15□□□□□ -1.91
HERC4-213ENST00000506515 TMEM239Q8WW34 195 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 TEX37Q96LM6 180 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 CCL13Q99616 98 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 PITX2Q99697 317 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 ZNF649Q9BS31 505 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 ADAT1Q9BUB4 502 aaKnown RBP3.15□□□□□ -1.91
HERC4-213ENST00000506515 ZNF426Q9BUY5 554 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 NMNAT1Q9HAN9 279 aaPredicted RBP3.15□□□□□ -1.91
HERC4-213ENST00000506515 ZNF391Q9UJN7 358 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 PCLOQ9Y6V0 5065 aa3.15□□□□□ -1.91
HERC4-213ENST00000506515 DYNC2H1Q8NCM8 4307 aaKnown RBP3.14□□□□□ -1.91
HERC4-213ENST00000506515 IGKV1-6A0A0C4DH72 117 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 C16orf90A8MZG2 172 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 M0QX08 132 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 MFNGO00587 321 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 UBDO15205 165 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 NDUFS5O43920 106 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 IGKV1-39P01597 117 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 IGKV1D-39P04432 117 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 CD14P08571 375 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 HIST1H3AP68431 136 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 STX3Q13277 289 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 ENDOGQ14249 297 aaKnown RBP3.14□□□□□ -1.91
HERC4-213ENST00000506515 MAPRE2Q15555 327 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 FAM201AQ5SY85 155 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 HIST2H3PS2Q5TEC6 136 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 LCN8Q6JVE9 175 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 SPINT4Q6UDR6 99 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 HIST2H3AQ71DI3 136 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 SGPP2Q8IWX5 399 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 C10orf111Q8N326 155 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 OR11H6Q8NGC7 330 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 MITD1Q8WV92 249 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 C20orf144Q9BQM9 153 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 RTL8AQ9BWD3 113 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 ENPP5Q9UJA9 477 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 NDUFAF1Q9Y375 327 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 ORC6Q9Y5N6 252 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 V9GYY9 64 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 CSMD3Q7Z407 3707 aa3.14□□□□□ -1.91
HERC4-213ENST00000506515 HYDINQ4G0P3 5121 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 FAM240AA0A1B0GVK7 77 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 hADV38S2A0JD32 116 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 CPSF4LA6NMK7 179 aaKnown RBP3.13□□□□□ -1.91
HERC4-213ENST00000506515 OR2AT4A6NND4 320 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 EFCAB9A8MZ26 197 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 LEUTXA8MZ59 168 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 SEC14L6B5MCN3 397 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 LRRN3E7EW58 273 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 KPNA4O00629 521 aaPredicted RBP3.13□□□□□ -1.91
HERC4-213ENST00000506515 SERPINA1P01009 418 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 C1QCP02747 245 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 CDKN2CP42773 168 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 GABRA2P47869 451 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 PSMB2P49721 201 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 BLCAPP62952 87 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 MEF2CQ06413 473 aaPredicted RBP3.13□□□□□ -1.91
HERC4-213ENST00000506515 DYNC1I2Q13409 638 aaKnown RBP3.13□□□□□ -1.91
HERC4-213ENST00000506515 SP6Q3SY56 376 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 CYP4Z1Q86W10 505 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 LYPD6Q86Y78 171 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 OR1M1Q8NGA1 313 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 OR13C9Q8NGT0 318 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 OR1P1Q8NH06 330 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 GTF2H4Q92759 462 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 MAL2Q969L2 176 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 MRM2Q9UI43 246 aaKnown RBP3.13□□□□□ -1.91
HERC4-213ENST00000506515 ERGIC3Q9Y282 383 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 AP3M1Q9Y2T2 418 aa3.13□□□□□ -1.91
HERC4-213ENST00000506515 TRAV8-7A0A075B6U6 113 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 TVP23AA6NH52 213 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 C17orf98A8MV24 154 aa3.12□□□□□ -1.91
HERC4-213ENST00000506515 H0Y980 276 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms