RNA–Protein interactions for RNA: ENST00000505551.5

LETM1-203, Transcript of leucine zipper and EF-hand containing transmembrane protein 1, humanhuman

TSL 1 (best)

Gene LETM1, Length 2,710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETM1-203ENST00000505551 NEURL1O76050 574 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 TNFRSF6BO95407 300 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 HTR1DP28221 377 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 TMPRSS3P57727 454 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 RPL30P62888 115 aaKnown RBP10.93□□□□□ -0.66
LETM1-203ENST00000505551 EFNB3Q15768 340 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 DHRS13Q6UX07 377 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 FADS6Q8N9I5 356 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 OR5A1Q8NGJ0 315 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 OR2K2Q8NGT1 345 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 AP1S3Q96PC3 154 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 USF3Q68DE3 2245 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 TNRC6AQ8NDV7 1962 aaKnown RBP10.93□□□□□ -0.66
LETM1-203ENST00000505551 A0A1W2PNU3 283 aaPredicted RBP10.93□□□□□ -0.66
LETM1-203ENST00000505551 SYNGR1O43759 233 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 FOXH1O75593 365 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 COX8AP10176 69 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 PPP1R32Q7Z5V6 425 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 MBD6Q96DN6 1003 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 IGF2BP2-AS1Q96M15 143 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 C1QTNF5Q9BXJ0 243 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 MS4A5Q9H3V2 200 aa10.93□□□□□ -0.66
LETM1-203ENST00000505551 MED13Q9UHV7 2174 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 DSPP15924 2871 aaKnown RBP10.92□□□□□ -0.66
LETM1-203ENST00000505551 PRSS46E5RG02 174 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 ZIC3O60481 467 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 RFPL3SP0C7P2 107 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 CFHR2P36980 270 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 BRWD1-AS2P59051 145 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 FOXE3Q13461 319 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 LTC4SQ16873 150 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 JKAMPQ9P055 326 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 JPT1Q9UK76 154 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 DNAJC13O75165 2243 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 IGHV1-24A0A0C4DH33 117 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 ZNF207O43670 478 aaKnown RBP10.92□□□□□ -0.66
LETM1-203ENST00000505551 CA1P00915 261 aaPredicted RBP10.92□□□□□ -0.66
LETM1-203ENST00000505551 B4GALT1P15291 398 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 NTF4P34130 210 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 UQCRFS1P47985 274 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 MFAP2P55001 183 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 TCTEX1D4Q5JR98 221 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 SPINK14Q6IE38 97 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 ZNF645Q8N7E2 425 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 FGFBP3Q8TAT2 258 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 SERTAD4Q9NUC0 356 aa10.92□□□□□ -0.66
LETM1-203ENST00000505551 DOCK10Q96BY6 2186 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 F8WDY8 70 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 H3BUT2 72 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 ACP1P24666 158 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 ZNF788Q6ZQV5 615 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 H2BFWTQ7Z2G1 175 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 OR10AG1Q8NH19 301 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 FAM168AQ92567 244 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 MRAP2Q96G30 205 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 C1orf159Q96HA4 380 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 PRDM14Q9GZV8 571 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 KCNIP1Q9NZI2 227 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 LSM4Q9Y4Z0 139 aaKnown RBP10.91□□□□□ -0.66
LETM1-203ENST00000505551 PSMB11A5LHX3 300 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 LEPROTL1O95214 131 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 P04436 131 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 HIST1H1EP10412 219 aaKnown RBP10.91□□□□□ -0.66
LETM1-203ENST00000505551 MGST1P10620 155 aaKnown RBP10.91□□□□□ -0.66
LETM1-203ENST00000505551 C9orf135Q5VTT2 229 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 BPIFA4PQ86YQ2 179 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 UBALD1Q8TB05 177 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 CHCHD1Q96BP2 118 aaKnown RBP10.91□□□□□ -0.66
LETM1-203ENST00000505551 ZNF488Q96MN9 340 aa10.91□□□□□ -0.66
LETM1-203ENST00000505551 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.9□□□□□ -0.66
LETM1-203ENST00000505551 A6NDN8 102 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 C17orf98A8MV24 154 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 F2RL2O00254 374 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 CDX4O14627 284 aaPredicted RBP10.9□□□□□ -0.66
LETM1-203ENST00000505551 LIFP15018 202 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 COL8A2P25067 703 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 HSD52Q0P140 79 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 H1FXQ92522 213 aaKnown RBP10.9□□□□□ -0.66
LETM1-203ENST00000505551 SSBP4Q9BWG4 385 aaPredicted RBP10.9□□□□□ -0.66
LETM1-203ENST00000505551 OBP2BQ9NPH6 170 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 GVINP1Q7Z2Y8 2422 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 PTPRZ1P23471 2315 aaPredicted RBP10.9□□□□□ -0.66
LETM1-203ENST00000505551 A0A0G2JLM5 398 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 A0A0J9YW62 118 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 TMEM189A5PLL7 270 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 ZNHIT1O43257 154 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 WIPF1O43516 503 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 MEF2CQ06413 473 aaPredicted RBP10.9□□□□□ -0.66
LETM1-203ENST00000505551 NUP35Q8NFH5 326 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 SSMEM1Q8WWF3 244 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 HES7Q9BYE0 225 aa10.9□□□□□ -0.66
LETM1-203ENST00000505551 SLC25A10Q9UBX3 287 aaPredicted RBP10.9□□□□□ -0.66
LETM1-203ENST00000505551 DOCK7Q96N67 2140 aa10.9□□□□□ -0.67
LETM1-203ENST00000505551 CD59P13987 128 aa10.89□□□□□ -0.67
LETM1-203ENST00000505551 CATR1Q13166 79 aa10.89□□□□□ -0.67
LETM1-203ENST00000505551 WIPI1Q5MNZ9 446 aaPredicted RBP10.89□□□□□ -0.67
LETM1-203ENST00000505551 ZNF497Q6ZNH5 498 aa10.89□□□□□ -0.67
LETM1-203ENST00000505551 TMEM251Q8N6I4 163 aa10.89□□□□□ -0.67
LETM1-203ENST00000505551 OR52E5Q8NH55 327 aa10.89□□□□□ -0.67
LETM1-203ENST00000505551 VSTM2AQ8TAG5 236 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms