RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 OR2G3Q8NGZ4 309 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 OR2T6Q8NHC8 308 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 PSMG3Q9BT73 122 aaPredicted RBP8.13□□□□□ -1.11
TPM3-217ENST00000504663 GGTLC1Q9BX51 225 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 NPCDR1Q9BY65 106 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 SLC25A32Q9H2D1 315 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 VSIRQ9H7M9 311 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 TIMM9Q9Y5J7 89 aa8.13□□□□□ -1.11
TPM3-217ENST00000504663 TRBV9A0A0B4J1U6 114 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 DNAJC9-AS1A6NH13 148 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 YIF1AO95070 293 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 MT-CO2P00403 227 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 IFNA7P01567 189 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 IGHV3-48P01763 117 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 FGF7P21781 194 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 SULT1A2P50226 295 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 ODF1Q14990 250 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 ECSCRQ19T08 205 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 AKIRIN2Q53H80 203 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 CLLU1Q5K131 121 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 BTNL8Q6UX41 500 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 SSX7Q7RTT5 188 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 TMEM144Q7Z5S9 345 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 MRPL41Q8IXM3 137 aaKnown RBP8.12□□□□□ -1.11
TPM3-217ENST00000504663 Q8N2B8 174 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 CACNG8Q8WXS5 425 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 RCC1LQ96I51 464 aaKnown RBP8.12□□□□□ -1.11
TPM3-217ENST00000504663 NOL4LQ96MY1 436 aaPredicted RBP8.12□□□□□ -1.11
TPM3-217ENST00000504663 LINC00527Q9UJ94 153 aa8.12□□□□□ -1.11
TPM3-217ENST00000504663 IGHV3-21A0A0B4J1V1 117 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 PSMB11A5LHX3 300 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 MFSD2BA6NFX1 497 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 NDUFB8O95169 186 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 BRI3O95415 125 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 LINC00869P0C866 280 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 CD99P14209 185 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 SRP14P37108 136 aaKnown RBP8.11□□□□□ -1.11
TPM3-217ENST00000504663 SUB1P53999 127 aaKnown RBP eCLIP8.11□□□□□ -1.11
TPM3-217ENST00000504663 EIF5AP63241 154 aaKnown RBP8.11□□□□□ -1.11
TPM3-217ENST00000504663 PRR20EP86478 221 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 PRR20CP86479 221 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 PRR20DP86480 221 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 PRR20BP86481 221 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 PRR20AP86496 221 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 ZNF726P1Q15940 193 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 ANKRD39Q53RE8 183 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 UNQ5815/PRO19632Q6UWF5 114 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 SLC35E3Q7Z769 313 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 TMEM116Q8NCL8 245 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 OR5T1Q8NG75 326 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 GNPNAT1Q96EK6 184 aaPredicted RBP8.11□□□□□ -1.11
TPM3-217ENST00000504663 MISP3Q96FF7 219 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 CXorf58Q96LI9 332 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 DUX5Q96PT3 197 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 TNFRSF19Q9NS68 423 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 SLC45A2Q9UMX9 530 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 HIVEP2P31629 2446 aa8.11□□□□□ -1.11
TPM3-217ENST00000504663 F8P00451 2351 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 TRAV41A0A0B4J266 112 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 CLDN34H7C241 214 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 CORTO00230 105 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 AGPAT2O15120 278 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 IFNA5P01569 189 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 IGLV1-40P01703 118 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 OPRK1P41145 380 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 FHITP49789 147 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 RND2P52198 227 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 GCSAMLQ5JQS6 135 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 LYPD6BQ8NI32 183 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 CCDC140Q96MF4 163 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 TMEM68Q96MH6 324 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 NPVFQ9HCQ7 196 aa8.1□□□□□ -1.11
TPM3-217ENST00000504663 SMCO3A2RU48 225 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 LINC00862A6NCI5 91 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 INAFM1C9JVW0 142 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 MPDU1O75352 247 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 OR2J3O76001 311 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 IGLC1P0CG04 106 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 DEFA4P12838 97 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 HNF1AP20823 631 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 FCGR2BP31994 310 aaPredicted RBP8.09□□□□□ -1.11
TPM3-217ENST00000504663 RAB2AP61019 212 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 AKR1C1Q04828 323 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 C9orf152Q5JTZ5 239 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 MIC13Q5XKP0 118 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 SLC25A24Q6NUK1 477 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 TEPPQ6URK8 271 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 C10orf99Q6UWK7 81 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 Q71RC1 249 aaPredicted RBP8.09□□□□□ -1.11
TPM3-217ENST00000504663 CLRN3Q8NCR9 226 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 OR1L6Q8NGR2 347 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 OR4X1Q8NH49 305 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 WIPF2Q8TF74 440 aaPredicted RBP8.09□□□□□ -1.11
TPM3-217ENST00000504663 NPIPB3Q92617 1050 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 ACY3Q96HD9 319 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 SLC35E1Q96K37 410 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 RPRMQ9NS64 109 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 SERTAD4Q9NUC0 356 aa8.09□□□□□ -1.11
TPM3-217ENST00000504663 AP4M1O00189 453 aa8.08□□□□□ -1.12
TPM3-217ENST00000504663 IGKV1-17P01599 117 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 118.3 ms