RNA–Protein interactions for RNA: ENST00000503982.1

LSM6-203, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 820 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-203ENST00000503982 STARD9Q9P2P6 4700 aa16.46■□□□□ 0.23
LSM6-203ENST00000503982 GNG7O60262 68 aa16.46■□□□□ 0.23
LSM6-203ENST00000503982 MT-CO2P00403 227 aa16.46■□□□□ 0.23
LSM6-203ENST00000503982 IFNA17P01571 189 aa16.46■□□□□ 0.23
LSM6-203ENST00000503982 CCR6P51684 374 aa16.46■□□□□ 0.23
LSM6-203ENST00000503982 SRPXP78539 464 aa16.46■□□□□ 0.23
LSM6-203ENST00000503982 IZUMO4Q1ZYL8 232 aa16.46■□□□□ 0.23
LSM6-203ENST00000503982 FAM219AQ8IW50 185 aa16.46■□□□□ 0.23
LSM6-203ENST00000503982 CENPSQ8N2Z9 138 aa16.46■□□□□ 0.23
LSM6-203ENST00000503982 RBPMSQ93062 196 aaKnown RBP16.46■□□□□ 0.23
LSM6-203ENST00000503982 TBC1D24Q9ULP9 559 aa16.46■□□□□ 0.23
LSM6-203ENST00000503982 CSMD3Q7Z407 3707 aa16.45■□□□□ 0.22
LSM6-203ENST00000503982 OR4C46A6NHA9 309 aa16.45■□□□□ 0.22
LSM6-203ENST00000503982 TSPAN4O14817 238 aa16.45■□□□□ 0.22
LSM6-203ENST00000503982 IGKV1-5P01602 117 aa16.45■□□□□ 0.22
LSM6-203ENST00000503982 ADMP35318 185 aa16.45■□□□□ 0.22
LSM6-203ENST00000503982 SNCAP37840 140 aa16.45■□□□□ 0.22
LSM6-203ENST00000503982 TMEM187Q14656 261 aa16.45■□□□□ 0.22
LSM6-203ENST00000503982 AARDQ4LEZ3 155 aa16.45■□□□□ 0.22
LSM6-203ENST00000503982 ENY2Q9NPA8 101 aa16.45■□□□□ 0.22
LSM6-203ENST00000503982 IGKV3-7A0A075B6H7 116 aa16.44■□□□□ 0.22
LSM6-203ENST00000503982 IGHV3-49A0A0A0MS15 119 aa16.44■□□□□ 0.22
LSM6-203ENST00000503982 C15orf62A8K5M9 175 aa16.44■□□□□ 0.22
LSM6-203ENST00000503982 F8W735 103 aaPredicted RBP16.44■□□□□ 0.22
LSM6-203ENST00000503982 K7EMT4 169 aa16.44■□□□□ 0.22
LSM6-203ENST00000503982 CTSGP08311 255 aa16.44■□□□□ 0.22
LSM6-203ENST00000503982 ANXA3P12429 323 aa16.44■□□□□ 0.22
LSM6-203ENST00000503982 APOC4P55056 127 aa16.44■□□□□ 0.22
LSM6-203ENST00000503982 SP6Q3SY56 376 aa16.44■□□□□ 0.22
LSM6-203ENST00000503982 LRTM2Q8N967 370 aa16.44■□□□□ 0.22
LSM6-203ENST00000503982 LHFPL5Q8TAF8 219 aa16.44■□□□□ 0.22
LSM6-203ENST00000503982 DUXBA0A1W2PPF3 345 aa16.43■□□□□ 0.22
LSM6-203ENST00000503982 I3L2K1 104 aa16.43■□□□□ 0.22
LSM6-203ENST00000503982 JTBO76095 146 aa16.43■□□□□ 0.22
LSM6-203ENST00000503982 TFPI2P48307 235 aa16.43■□□□□ 0.22
LSM6-203ENST00000503982 HOXA1P49639 335 aaPredicted RBP16.43■□□□□ 0.22
LSM6-203ENST00000503982 IFITM3Q01628 133 aa16.43■□□□□ 0.22
LSM6-203ENST00000503982 TMEM116Q8NCL8 245 aa16.43■□□□□ 0.22
LSM6-203ENST00000503982 TXN2Q99757 166 aa16.43■□□□□ 0.22
LSM6-203ENST00000503982 RYR2Q92736 4967 aa16.43■□□□□ 0.22
LSM6-203ENST00000503982 SACSQ9NZJ4 4579 aa16.43■□□□□ 0.22
LSM6-203ENST00000503982 AKR1C4P17516 323 aa16.42■□□□□ 0.22
LSM6-203ENST00000503982 TMED4Q7Z7H5 227 aa16.42■□□□□ 0.22
LSM6-203ENST00000503982 SELENOHQ8IZQ5 122 aaKnown RBP16.42■□□□□ 0.22
LSM6-203ENST00000503982 ZNF114Q8NC26 417 aa16.42■□□□□ 0.22
LSM6-203ENST00000503982 RRNAD1Q96FB5 475 aaKnown RBP16.42■□□□□ 0.22
LSM6-203ENST00000503982 RHPN1-AS1Q9BWJ2 59 aa16.42■□□□□ 0.22
LSM6-203ENST00000503982 SMPXQ9UHP9 88 aa16.42■□□□□ 0.22
LSM6-203ENST00000503982 A0A0B4J2A0 478 aa16.41■□□□□ 0.22
LSM6-203ENST00000503982 IGHV7-4-1A0A0J9YVY3 117 aa16.41■□□□□ 0.22
LSM6-203ENST00000503982 LINC00854A0A1B0GVQ3 168 aa16.41■□□□□ 0.22
LSM6-203ENST00000503982 SFT2D2O95562 160 aa16.41■□□□□ 0.22
LSM6-203ENST00000503982 RPL35AP18077 110 aaKnown RBP16.41■□□□□ 0.22
LSM6-203ENST00000503982 NPBWR1P48145 328 aa16.41■□□□□ 0.22
LSM6-203ENST00000503982 SUB1P53999 127 aaKnown RBP eCLIP16.41■□□□□ 0.22
LSM6-203ENST00000503982 MZT2BQ6NZ67 158 aa16.41■□□□□ 0.22
LSM6-203ENST00000503982 DUSP18Q8NEJ0 188 aa16.41■□□□□ 0.22
LSM6-203ENST00000503982 RNF2Q99496 336 aa16.41■□□□□ 0.22
LSM6-203ENST00000503982 LYSTQ99698 3801 aa16.41■□□□□ 0.22
LSM6-203ENST00000503982 OVOL2Q9BRP0 275 aa16.41■□□□□ 0.22
LSM6-203ENST00000503982 SHPKQ9UHJ6 478 aa16.41■□□□□ 0.22
LSM6-203ENST00000503982 IGHV3OR16-13A0A075B7E8 117 aa16.4■□□□□ 0.22
LSM6-203ENST00000503982 TRAV14DV4A0A0A6YYC5 116 aa16.4■□□□□ 0.22
LSM6-203ENST00000503982 IGHV3-74A0A0B4J1X5 117 aa16.4■□□□□ 0.22
LSM6-203ENST00000503982 INS-IGF2F8WCM5 200 aa16.4■□□□□ 0.22
LSM6-203ENST00000503982 ST8SIA3O43173 380 aa16.4■□□□□ 0.22
LSM6-203ENST00000503982 TCRBP04435 133 aa16.4■□□□□ 0.22
LSM6-203ENST00000503982 PPP1R1AQ13522 171 aa16.4■□□□□ 0.22
LSM6-203ENST00000503982 LGI3Q8N145 548 aa16.4■□□□□ 0.22
LSM6-203ENST00000503982 GINS3Q9BRX5 216 aa16.4■□□□□ 0.22
LSM6-203ENST00000503982 C20orf85Q9H1P6 137 aa16.4■□□□□ 0.22
LSM6-203ENST00000503982 CACFD1Q9UGQ2 172 aa16.4■□□□□ 0.22
LSM6-203ENST00000503982 CHEK1O14757 476 aa16.39■□□□□ 0.21
LSM6-203ENST00000503982 BMI1P35226 326 aa16.39■□□□□ 0.21
LSM6-203ENST00000503982 DEFB135Q30KP9 77 aa16.39■□□□□ 0.21
LSM6-203ENST00000503982 ODF3L2Q3SX64 289 aa16.39■□□□□ 0.21
LSM6-203ENST00000503982 TMEM268Q5VZI3 342 aa16.39■□□□□ 0.21
LSM6-203ENST00000503982 STPG3Q8N7X2 389 aa16.39■□□□□ 0.21
LSM6-203ENST00000503982 A0A0B4J293 547 aa16.38■□□□□ 0.21
LSM6-203ENST00000503982 A0A0G2JRQ6 117 aa16.38■□□□□ 0.21
LSM6-203ENST00000503982 SPRY2O43597 315 aa16.38■□□□□ 0.21
LSM6-203ENST00000503982 NMSQ5H8A3 153 aa16.38■□□□□ 0.21
LSM6-203ENST00000503982 GBGT1Q8N5D6 347 aa16.38■□□□□ 0.21
LSM6-203ENST00000503982 FLVCR2Q9UPI3 526 aa16.38■□□□□ 0.21
LSM6-203ENST00000503982 C9orf170A2RU37 121 aa16.37■□□□□ 0.21
LSM6-203ENST00000503982 CORTO00230 105 aa16.37■□□□□ 0.21
LSM6-203ENST00000503982 OR4E1P0C645 316 aa16.37■□□□□ 0.21
LSM6-203ENST00000503982 FCGR2BP31994 310 aaPredicted RBP16.37■□□□□ 0.21
LSM6-203ENST00000503982 PAFAH1B2P68402 229 aa16.37■□□□□ 0.21
LSM6-203ENST00000503982 PMS2P11Q13670 270 aa16.37■□□□□ 0.21
LSM6-203ENST00000503982 WFDC3Q8IUB2 231 aa16.37■□□□□ 0.21
LSM6-203ENST00000503982 APRG1Q8IVJ8 170 aa16.37■□□□□ 0.21
LSM6-203ENST00000503982 OR52E5Q8NH55 327 aa16.37■□□□□ 0.21
LSM6-203ENST00000503982 FAM240BA0A1B0GVZ2 78 aa16.36■□□□□ 0.21
LSM6-203ENST00000503982 UBE2CO00762 179 aa16.36■□□□□ 0.21
LSM6-203ENST00000503982 SCGB2A1O75556 95 aa16.36■□□□□ 0.21
LSM6-203ENST00000503982 SLC25A6P12236 298 aa16.36■□□□□ 0.21
LSM6-203ENST00000503982 VAMP1P23763 118 aa16.36■□□□□ 0.21
LSM6-203ENST00000503982 OPRK1P41145 380 aa16.36■□□□□ 0.21
LSM6-203ENST00000503982 CMC4P56277 68 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms