RNA–Protein interactions for RNA: ENST00000503060.5

USP46-204, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5

Gene USP46, Length 2,437 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-204ENST00000503060 LINC00311Q8N616 119 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 ZNF709Q8N972 641 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 C8orf31Q8N9H6 132 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 TMEM170AQ8WVE7 144 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 PRORYQ9H606 182 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 PRNDQ9UKY0 176 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 WDR83OSQ9Y284 106 aa9.4□□□□□ -0.9
USP46-204ENST00000503060 TET2Q6N021 2002 aaPredicted RBP9.4□□□□□ -0.9
USP46-204ENST00000503060 PPIAL4CA0A0B4J2A2 164 aa9.4□□□□□ -0.91
USP46-204ENST00000503060 C7orf77A4D0Y5 90 aa9.4□□□□□ -0.91
USP46-204ENST00000503060 SRRM4A7MD48 611 aaKnown RBP9.4□□□□□ -0.91
USP46-204ENST00000503060 PRSS46E5RG02 174 aa9.4□□□□□ -0.91
USP46-204ENST00000503060 J3QR06 171 aa9.4□□□□□ -0.91
USP46-204ENST00000503060 PPP1R2P9O14990 202 aa9.4□□□□□ -0.91
USP46-204ENST00000503060 PDE6DO43924 150 aa9.4□□□□□ -0.91
USP46-204ENST00000503060 APOA2P02652 100 aa9.4□□□□□ -0.91
USP46-204ENST00000503060 LY6DQ14210 128 aa9.4□□□□□ -0.91
USP46-204ENST00000503060 OR4P4Q8NGL7 312 aa9.4□□□□□ -0.91
USP46-204ENST00000503060 RNASEH2CQ8TDP1 164 aaKnown RBP9.4□□□□□ -0.91
USP46-204ENST00000503060 RPUSD4Q96CM3 377 aaKnown RBP9.4□□□□□ -0.91
USP46-204ENST00000503060 RPS10P5Q9NQ39 176 aa9.4□□□□□ -0.91
USP46-204ENST00000503060 SMCO4Q9NRQ5 59 aa9.4□□□□□ -0.91
USP46-204ENST00000503060 SLC39A9Q9NUM3 307 aa9.4□□□□□ -0.91
USP46-204ENST00000503060 OR51B2Q9Y5P1 312 aa9.4□□□□□ -0.91
USP46-204ENST00000503060 NBEAQ8NFP9 2946 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 C17orf112F2Z3M2 114 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 CLDN34H7C241 214 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 NBR2O15453 112 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 CRYBA1P05813 215 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 BCL2P10415 239 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 MYOD1P15172 320 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 ENY2Q9NPA8 101 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 SS18L2Q9UHA2 77 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 UFC1Q9Y3C8 167 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 CTXND1A0A1B0GTU2 59 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 ZFP92A6NM28 416 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 TEX22C9J3V5 150 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 H0YJW9 148 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 IGHV2-5P01817 119 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 PLA2G5P39877 138 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 LGALS4P56470 323 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 DLK1P80370 383 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 FAM71F2Q6NXP2 309 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 Q8N7P7 452 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 CYB561D1Q8N8Q1 229 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 OR5AN1Q8NGI8 311 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 OR10G4Q8NGN3 311 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 OR10G9Q8NGN4 311 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 OR10G7Q8NGN6 311 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 OSR1Q8TAX0 266 aaPredicted RBP9.39□□□□□ -0.91
USP46-204ENST00000503060 VPREB3Q9UKI3 123 aa9.39□□□□□ -0.91
USP46-204ENST00000503060 CGB1A6NKQ9 187 aa9.38□□□□□ -0.91
USP46-204ENST00000503060 OR2J3O76001 311 aa9.38□□□□□ -0.91
USP46-204ENST00000503060 KBTBD11O94819 623 aa9.38□□□□□ -0.91
USP46-204ENST00000503060 FSTL3O95633 263 aa9.38□□□□□ -0.91
USP46-204ENST00000503060 REG1BP48304 166 aa9.38□□□□□ -0.91
USP46-204ENST00000503060 KIAA0141Q14154 515 aaPredicted RBP9.38□□□□□ -0.91
USP46-204ENST00000503060 OR5R1Q8NH85 324 aa9.38□□□□□ -0.91
USP46-204ENST00000503060 ACTR3CQ9C0K3 210 aaPredicted RBP9.38□□□□□ -0.91
USP46-204ENST00000503060 SLC25A22Q9H936 323 aa9.38□□□□□ -0.91
USP46-204ENST00000503060 BET1LQ9NYM9 111 aa9.38□□□□□ -0.91
USP46-204ENST00000503060 RALYQ9UKM9 306 aaKnown RBP9.38□□□□□ -0.91
USP46-204ENST00000503060 ZNF257Q9Y2Q1 563 aa9.38□□□□□ -0.91
USP46-204ENST00000503060 ATRXP46100 2492 aa9.38□□□□□ -0.91
USP46-204ENST00000503060 SAA1P0DJI8 122 aaPredicted RBP9.37□□□□□ -0.91
USP46-204ENST00000503060 IGHV1-8P0DP01 117 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 NPY1RP25929 384 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 RHEBQ15382 184 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 C6orf226Q5I0X4 101 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 C11orf42Q8N5U0 333 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 OR9G1Q8NH87 305 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 NABP2Q9BQ15 211 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 ANKHD1Q8IWZ3 2542 aaKnown RBP9.37□□□□□ -0.91
USP46-204ENST00000503060 TMEM89A2RUT3 159 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 MPDU1O75352 247 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 IFNA1P01562 189 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 ZNF137PP52743 207 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 PRCDQ00LT1 54 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 DIAPH2-AS1Q14236 149 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 TREML4Q6UXN2 200 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 ZNF841Q6ZN19 808 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 LINC01551Q86U37 167 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 OR1L6Q8NGR2 347 aa9.37□□□□□ -0.91
USP46-204ENST00000503060 SSBP4Q9BWG4 385 aaPredicted RBP9.37□□□□□ -0.91
USP46-204ENST00000503060 TEX50A0A1B0GTY4 177 aa9.36□□□□□ -0.91
USP46-204ENST00000503060 COLCA2A8K830 154 aa9.36□□□□□ -0.91
USP46-204ENST00000503060 H3BQ15 152 aa9.36□□□□□ -0.91
USP46-204ENST00000503060 CA2P00918 260 aa9.36□□□□□ -0.91
USP46-204ENST00000503060 ACOT6Q3I5F7 207 aaPredicted RBP9.36□□□□□ -0.91
USP46-204ENST00000503060 ORAOV1Q8WV07 137 aa9.36□□□□□ -0.91
USP46-204ENST00000503060 FLYWCH2Q96CP2 140 aaKnown RBP9.36□□□□□ -0.91
USP46-204ENST00000503060 TMEM133Q9H2Q1 129 aa9.36□□□□□ -0.91
USP46-204ENST00000503060 PLEKHA3Q9HB20 300 aa9.36□□□□□ -0.91
USP46-204ENST00000503060 FKBP11Q9NYL4 201 aa9.36□□□□□ -0.91
USP46-204ENST00000503060 HMGB3O15347 200 aaKnown RBP9.36□□□□□ -0.91
USP46-204ENST00000503060 S100A2P29034 98 aa9.36□□□□□ -0.91
USP46-204ENST00000503060 PDPNQ86YL7 162 aa9.36□□□□□ -0.91
USP46-204ENST00000503060 C15orf54Q8N8G6 183 aa9.36□□□□□ -0.91
USP46-204ENST00000503060 CBLN4Q9NTU7 201 aa9.36□□□□□ -0.91
USP46-204ENST00000503060 VAX2Q9UIW0 290 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms