RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 TMEM267Q0VDI3 215 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 NEDD8Q15843 81 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 UBE2NLQ5JXB2 153 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 C1orf194Q5T5A4 169 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 TMEM205Q6UW68 189 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 LINC00596Q86U02 117 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 DOLPP1Q86YN1 238 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 DEFB125Q8N687 156 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR2M7Q8NG81 312 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF721Q8TF20 911 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 BORCS7Q96B45 105 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 SLC25A44Q96H78 314 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 SLC35E1Q96K37 410 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 MGLLQ99685 303 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 ANAPC13Q9BS18 74 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 SCRT2Q9NQ03 307 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 DHCR7Q9UBM7 475 aaKnown RBP3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF469Q96JG9 3925 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 DSPPQ9NZW4 1301 aa3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 SNRNP200O75643 2136 aaKnown RBP3.13□□□□□ -1.91
HMGB1P21-201ENST00000502313 APCP25054 2843 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGHV3OR16-10A0A075B7F0 116 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGKV3D-11A0A0A0MRZ8 115 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 A0A1B0GWA3 101 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 hADV38S2A0JD32 116 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGSF23A1L1A6 192 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 C5orf49A4QMS7 147 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 KRBOX1C9JBD0 128 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 KPNA4O00629 521 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 ISLRO14498 428 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 PDCD5O14737 125 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 SULT1C4O75897 302 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 SNAPC5O75971 98 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGKV3-20P01619 116 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 CRYBA1P05813 215 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 SOD3P08294 240 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 CD14P08571 375 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 FGF6P10767 208 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 S100A1P23297 94 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 GATA2P23769 480 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 MDH2P40926 338 aaKnown RBP3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 MP68P56378 58 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 DSCR4P56555 118 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 DEFA3P59666 94 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 HSPE1P61604 102 aaKnown RBP3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF846Q147U1 533 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 SSX1Q16384 188 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 RSPO1Q2MKA7 263 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 DEFB110Q30KQ9 67 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 ABCA11PQ4W5N1 156 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 KLHL12Q53G59 568 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 TCTEX1D4Q5JR98 221 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 ACP7Q6ZNF0 438 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF497Q6ZNH5 498 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 Q6ZRU5 148 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF561Q8N587 486 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR1J4Q8NGS1 313 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 GPR119Q8TDV5 335 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 GTSF1Q8WW33 167 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 ACOT12Q8WYK0 555 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 C11orf40Q8WZ69 217 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 ERMAPQ96PL5 475 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 HSD17B10Q99714 261 aaKnown RBP3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 LITAFQ99732 161 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 OPRPNQ99935 248 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 YIPF3Q9GZM5 350 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 AICDAQ9GZX7 198 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 CMC2Q9NRP2 79 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 UQCC1Q9NVA1 299 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 MED29Q9NX70 200 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 OR52A1Q9UKL2 312 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 WASHC3Q9Y3C0 194 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 HSPB11Q9Y547 144 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 IER3IP1Q9Y5U9 82 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 MED13Q9UHV7 2174 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 OTOGQ6ZRI0 2925 aa3.12□□□□□ -1.91
HMGB1P21-201ENST00000502313 CNTRLQ7Z7A1 2325 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 TMED7-TICAM2A0A0A6YYA0 188 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 LOC102725191A0A1B0GVB3 256 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF670-ZNF695F2Z2N8 137 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 HMGB3O15347 200 aaKnown RBP3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 ANGPTL7O43827 346 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 CD5LO43866 347 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 IGLV2-23P01705 113 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 KLK2P20151 261 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 DDTP30046 118 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 GLRXP35754 106 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 INPP1P49441 399 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 ZNF136P52737 540 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 WNT4P56705 351 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 FABP5Q01469 135 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 KRTAP1-1Q07627 177 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 ERCC8Q13216 396 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 EBPQ15125 230 aaKnown RBP3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 KCNJ8Q15842 424 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 BATFQ16520 125 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 TMEM78Q5T7P6 136 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 C12orf73Q69YU5 71 aa3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 RPL22L1Q6P5R6 122 aaKnown RBP3.11□□□□□ -1.91
HMGB1P21-201ENST00000502313 SHISA6Q6ZSJ9 500 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms