RNA–Protein interactions for RNA: ENST00000498711.1

CLTC-209, Transcript of clathrin heavy chain, humanhuman

TSL 1 (best)

Gene CLTC, Length 2,941 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-209ENST00000498711 PPOXP50336 477 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 HSPE1P61604 102 aaKnown RBP3.16□□□□□ -1.9
CLTC-209ENST00000498711 RBPJQ06330 500 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 AESQ08117 197 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 C17orf58Q2M2W7 97 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 RPEL1Q2QD12 228 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 C2orf83Q53S99 150 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 MIC13Q5XKP0 118 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 LRP11Q86VZ4 500 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 NHLRC2Q8NBF2 726 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 OR5AU1Q8NGC0 362 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 OR4P4Q8NGL7 312 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 OR1L6Q8NGR2 347 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 KLF14Q8TD94 323 aaPredicted RBP3.16□□□□□ -1.9
CLTC-209ENST00000498711 HES7Q9BYE0 225 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 COMMD5Q9GZQ3 224 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 TMEM167BQ9NRX6 74 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 FOXJ2Q9P0K8 574 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 TCF19Q9Y242 345 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 KLF13Q9Y2Y9 288 aaPredicted RBP3.16□□□□□ -1.9
CLTC-209ENST00000498711 GOLT1BQ9Y3E0 138 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 TRAV3A0A0B4J244 114 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 A0A1W2PPV4 95 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 IZUMO1RA6ND01 250 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 SRRM5B3KS81 715 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 OVOL3O00110 214 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 WNT9BO14905 357 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 FOXH1O75593 365 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 IGLC2P0DOY2 106 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 IGLC3P0DOY3 106 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 ZNF25P17030 456 aaPredicted RBP3.16□□□□□ -1.9
CLTC-209ENST00000498711 CDKN1AP38936 164 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 REG1BP48304 166 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 CEBPDP49716 269 aaPredicted RBP3.16□□□□□ -1.9
CLTC-209ENST00000498711 RPS20P60866 119 aaKnown RBP3.16□□□□□ -1.9
CLTC-209ENST00000498711 PAX2Q02962 417 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 TMEM183BQ1AE95 376 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 C9orf135Q5VTT2 229 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 SPATA31B1PQ5VZV4 182 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 C19orf35Q6ZS72 473 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 MMD2Q8IY49 270 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 GCSAMQ8N6F7 178 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 ST6GALNAC3Q8NDV1 305 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 ZNF596Q8TC21 504 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 ORAOV1Q8WV07 137 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 SMIM12Q96EX1 92 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 KCNS1Q96KK3 526 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 FAM167A-AS1Q96KT0 104 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 UHRF2Q96PU4 802 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 GNB4Q9HAV0 340 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 ZFP30Q9Y2G7 519 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 DSPP15924 2871 aaKnown RBP3.16□□□□□ -1.9
CLTC-209ENST00000498711 BSNQ9UPA5 3926 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 IGKV1D-17A0A075B6S4 117 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 F2Z2F3 143 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 KLRC4-KLRK1H3BQV0 150 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 K7EP13 123 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 UPK2O00526 184 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 MGST3O14880 152 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 SPINT2O43291 252 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 CGAP01215 116 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 FRMD6-AS1P0C7T7 363 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 PLA2G2AP14555 144 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 PRDX2P32119 198 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 THBS3P49746 956 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 ZNF83P51522 516 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 EDDM3BP56851 147 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 RPL31P62899 125 aaKnown RBP3.16□□□□□ -1.9
CLTC-209ENST00000498711 ZNF90Q03938 601 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 SRYQ05066 204 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 CLEC12BQ2HXU8 276 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 LCE3BQ5TA77 95 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 IGFL2Q6UWQ7 119 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 Q6ZT83 130 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 GATD1Q8NB37 220 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 OR1L8Q8NGR8 309 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 OR5B3Q8NH48 314 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 MRGPRDQ8TDS7 321 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 TMEM190Q8WZ59 177 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 ADTRPQ96IZ2 230 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 HSPB9Q9BQS6 159 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 MRPL32Q9BYC8 188 aaKnown RBP3.16□□□□□ -1.9
CLTC-209ENST00000498711 IDI2-AS1Q9NZ38 188 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 IL19Q9UHD0 177 aa3.16□□□□□ -1.9
CLTC-209ENST00000498711 RBM7Q9Y580 266 aaKnown RBP3.16□□□□□ -1.9
CLTC-209ENST00000498711 A0A1B0GXF2 115 aa3.15□□□□□ -1.9
CLTC-209ENST00000498711 BMPR1BO00238 502 aa3.15□□□□□ -1.9
CLTC-209ENST00000498711 CRXO43186 299 aaPredicted RBP3.15□□□□□ -1.9
CLTC-209ENST00000498711 ZNF253O75346 499 aa3.15□□□□□ -1.9
CLTC-209ENST00000498711 HLA-DQA1P01909 254 aa3.15□□□□□ -1.9
CLTC-209ENST00000498711 DEFA4P12838 97 aa3.15□□□□□ -1.9
CLTC-209ENST00000498711 CBLN1P23435 193 aa3.15□□□□□ -1.9
CLTC-209ENST00000498711 RAB7AP51149 207 aa3.15□□□□□ -1.9
CLTC-209ENST00000498711 LINC00205P59089 165 aa3.15□□□□□ -1.9
CLTC-209ENST00000498711 SELENOVP59797 346 aa3.15□□□□□ -1.9
CLTC-209ENST00000498711 PRCDQ00LT1 54 aa3.15□□□□□ -1.9
CLTC-209ENST00000498711 USF2Q15853 346 aaPredicted RBP3.15□□□□□ -1.9
CLTC-209ENST00000498711 COL5A1-AS1Q5SY13 56 aa3.15□□□□□ -1.9
CLTC-209ENST00000498711 Q6YL49 198 aa3.15□□□□□ -1.9
CLTC-209ENST00000498711 ABHD12Q8N2K0 398 aa3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms