RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 NUPL2O15504 423 aaKnown RBP8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 IGKV1-17P01599 117 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 SLC25A6P12236 298 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 S100A5P33763 92 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 SNCAP37840 140 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 HTR2BP41595 481 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 NPBWR1P48145 328 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 CCR6P51684 374 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 SUB1P53999 127 aaKnown RBP eCLIP8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 AP3S2P59780 193 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 BAK1Q16611 211 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 ANKRD55Q3KP44 614 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 SPINK9Q5DT21 86 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 TOMM20LQ6UXN7 152 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 LYZL2Q7Z4W2 148 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 TOMM5Q8N4H5 51 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 TMEM116Q8NCL8 245 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 RNASEH2CQ8TDP1 164 aaKnown RBP8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 MISP3Q96FF7 219 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 ZMAT4Q9H898 229 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 NDUFA13Q9P0J0 144 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 CACNG5Q9UF02 275 aa8.12□□□□□ -1.11
SHROOM3-210ENST00000497440 A0A1B0GU03 582 aa8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 CLN5O75503 358 aa8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 SCAF4O95104 1147 aaKnown RBP8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 IGHV3-48P01763 117 aa8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 SULT1A3P0DMM9 295 aa8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 SULT1A4P0DMN0 295 aa8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 FAUP35544 74 aaKnown RBP8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 ATP5IP56385 69 aaPredicted RBP8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 PYDC2Q56P42 97 aa8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 Q56UQ5 140 aa8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 LILRB2Q8N423 598 aa8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 DUSP18Q8NEJ0 188 aa8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 SPATA25Q9BR10 227 aa8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 WFDC10AQ9H1F0 79 aa8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 U3KQE9 123 aa8.11□□□□□ -1.11
SHROOM3-210ENST00000497440 VPS13DQ5THJ4 4388 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 TRAV14DV4A0A0A6YYC5 116 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 PIGBOS1A0A0B4J2F0 54 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 NXPH3O95157 252 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 UBE2MP61081 183 aaKnown RBP8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 SRPXP78539 464 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 TNFRSF9Q07011 255 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 GUCA2BQ16661 112 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 ODF3L2Q3SX64 289 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 SPANXN2Q5MJ10 180 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 LAMTOR1Q6IAA8 161 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 PRSS54Q6PEW0 395 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 ZNF600Q6ZNG1 722 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 LINC00299Q6ZSB3 139 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 SLC16A13Q7RTY0 426 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 LGI3Q8N145 548 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 UBAC2Q8NBM4 344 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 RNF2Q99496 336 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 PDCD10Q9BUL8 212 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 RHPN1-AS1Q9BWJ2 59 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 TUBA4BQ9H853 241 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 MCUBQ9NWR8 336 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 PRR13Q9NZ81 148 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 U3KQ87 197 aa8.1□□□□□ -1.11
SHROOM3-210ENST00000497440 TRAV30A0A087WSZ9 112 aa8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 CCDC160A6NGH7 325 aa8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 GNG7O60262 68 aa8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 CD5P06127 495 aa8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 IGLC1P0CG04 106 aa8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 AKR1C4P17516 323 aa8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 CRYBB3P26998 211 aa8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 BTCP35070 178 aa8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 SMCO1Q147U7 214 aa8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 RBPMS2Q6ZRY4 209 aaKnown RBP8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 OR52B4Q8NGK2 314 aa8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 MUC7Q8TAX7 377 aa8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 PINX1Q96BK5 328 aaKnown RBP8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 SRD5A3Q9H8P0 318 aa8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 ALMS1Q8TCU4 4167 aa8.09□□□□□ -1.11
SHROOM3-210ENST00000497440 TRAV2A0A0B4J234 112 aa8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 NAP1L6A6NFF2 107 aa8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 FAM90A26D6RGX4 464 aa8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 NDUFB6O95139 128 aa8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 SFT2D2O95562 160 aa8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 APOHP02749 345 aaPredicted RBP8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 SLC25A4P12235 298 aa8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 ANXA3P12429 323 aa8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 HOXA1P49639 335 aaPredicted RBP8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 YPEL3P61236 119 aaPredicted RBP8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 RBMS2Q15434 407 aaKnown RBP8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 CASC10Q5T4H9 136 aa8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 WFDC3Q8IUB2 231 aa8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 SLC24A4Q8NFF2 622 aa8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 C20orf24Q9BUV8 137 aa8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 HEYLQ9NQ87 328 aaPredicted RBP8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 TMED3Q9Y3Q3 217 aa8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 PUS1Q9Y606 427 aaKnown RBP eCLIP8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 SELENOKQ9Y6D0 94 aa8.08□□□□□ -1.12
SHROOM3-210ENST00000497440 IGHV3OR16-8A0A075B7F1 116 aa8.07□□□□□ -1.12
SHROOM3-210ENST00000497440 KIR2DL5BA0A0G2JN68 375 aa8.07□□□□□ -1.12
SHROOM3-210ENST00000497440 KIR2DL5BA0A0G2JPC4 375 aa8.07□□□□□ -1.12
SHROOM3-210ENST00000497440 OR4C46A6NHA9 309 aa8.07□□□□□ -1.12
SHROOM3-210ENST00000497440 ZNF207O43670 478 aaKnown RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms