RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 FMN1Q68DA7 1419 aa2.75□□□□□ -1.97
SNX13-211ENST00000496855 K7EP13 123 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 TAX1BP3O14907 124 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 UBE2L6O14933 153 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 SLC25A16P16260 332 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 CCR2P41597 374 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 RPL27AP46776 148 aaKnown RBP2.74□□□□□ -1.97
SNX13-211ENST00000496855 AKR1C2P52895 323 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 TAS2R30P59541 319 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 RRN3P1Q2M238 152 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 SCGB2B2Q4G0G5 96 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 LINC01554Q52M75 96 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 DNLZQ5SXM8 178 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 Q5XG85 94 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 RPL22L1Q6P5R6 122 aaKnown RBP2.74□□□□□ -1.97
SNX13-211ENST00000496855 CLDND2Q8NHS1 167 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 OR2J1Q9GZK6 312 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 HSPB8Q9UJY1 196 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 UHRF1BP1Q6BDS2 1440 aa2.74□□□□□ -1.97
SNX13-211ENST00000496855 ADCY10Q96PN6 1610 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 CUL9Q8IWT3 2517 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 A0A1B0GW54 56 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 TRDV1A0A1B0GX56 115 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 A8MWP6 167 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 C1orf196B1AJZ1 125 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 CST8O60676 142 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 NDUFB2O95178 105 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 GADD45GO95257 159 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 CISD3P0C7P0 127 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 S100A11P31949 105 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 FUT5Q11128 374 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 LINC00483Q53H64 154 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 AGTRAPQ6RW13 159 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 ZNF322Q6U7Q0 402 aaPredicted RBP2.73□□□□□ -1.97
SNX13-211ENST00000496855 OR51T1Q8NGJ9 327 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 TERB2Q8NHR7 220 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 KLF14Q8TD94 323 aaPredicted RBP2.73□□□□□ -1.97
SNX13-211ENST00000496855 TEX37Q96LM6 180 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 POPDC3Q9HBV1 291 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 RNF11Q9Y3C5 154 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 SIPA1L1O43166 1804 aa2.73□□□□□ -1.97
SNX13-211ENST00000496855 CDK12Q9NYV4 1490 aaPredicted RBP2.73□□□□□ -1.97
SNX13-211ENST00000496855 SLIT3O75094 1523 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 TMEM189A5PLL7 270 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 GGT3PA6NGU5 568 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 C17orf51A8MQB3 221 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 PFDN1O60925 122 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 IGHV1-69P01742 117 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 TRGC2P03986 189 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 MPC1LP0DKB6 136 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 OGNP20774 298 aaKnown RBP2.72□□□□□ -1.97
SNX13-211ENST00000496855 CASP1P29466 404 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 SDC4P31431 198 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 CD200P41217 278 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 PSG9Q00887 426 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 MEF2BQ02080 365 aaPredicted RBP2.72□□□□□ -1.97
SNX13-211ENST00000496855 RPL18Q07020 188 aaKnown RBP2.72□□□□□ -1.97
SNX13-211ENST00000496855 FOXF1Q12946 379 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 KPRPQ5T749 579 aaPredicted RBP2.72□□□□□ -1.97
SNX13-211ENST00000496855 C2orf91Q6ZV80 131 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 ANGPTL5Q86XS5 388 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 C3orf22Q8N5N4 141 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 TMEM229BQ8NBD8 167 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 C1orf64Q8NEQ6 169 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 RTL8AQ9BWD3 113 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 TMEM126AQ9H061 195 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 TUBA4BQ9H853 241 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 MCTS1Q9ULC4 181 aaKnown RBP2.72□□□□□ -1.97
SNX13-211ENST00000496855 TRAPPC1Q9Y5R8 145 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 S4R3C0 116 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 TEX14Q8IWB6 1497 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 COL27A1Q8IZC6 1860 aaPredicted RBP2.72□□□□□ -1.97
SNX13-211ENST00000496855 GLI2P10070 1586 aa2.72□□□□□ -1.97
SNX13-211ENST00000496855 DHRS12A0PJE2 317 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 ODAMA1E959 279 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 GABARAPH6UMI1 98 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 OVOL1O14753 267 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 BET1O15155 118 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 OR2T1O43869 369 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 TNFSF15O95150 251 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 IFNA10P01566 189 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 MUC1P15941 1255 aaPredicted RBP2.71□□□□□ -1.97
SNX13-211ENST00000496855 NFYBP25208 207 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 RNASE4P34096 147 aaKnown RBP2.71□□□□□ -1.97
SNX13-211ENST00000496855 DNAJB13P59910 316 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 LYRM7Q5U5X0 104 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 PRR15Q8IV56 129 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 SMCR5Q8TEV8 140 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 MGLLQ99685 303 aa2.71□□□□□ -1.97
SNX13-211ENST00000496855 DENND4CQ5VZ89 1909 aa2.71□□□□□ -1.98
SNX13-211ENST00000496855 MYH10P35580 1976 aa2.71□□□□□ -1.98
SNX13-211ENST00000496855 DOCK4Q8N1I0 1966 aa2.71□□□□□ -1.98
SNX13-211ENST00000496855 MAP3K4Q9Y6R4 1608 aa2.71□□□□□ -1.98
SNX13-211ENST00000496855 IGHV3OR16-8A0A075B7F1 116 aa2.71□□□□□ -1.98
SNX13-211ENST00000496855 ZNF98A6NK75 572 aa2.71□□□□□ -1.98
SNX13-211ENST00000496855 C9JAW5 83 aa2.71□□□□□ -1.98
SNX13-211ENST00000496855 CYB5BO43169 146 aa2.71□□□□□ -1.98
SNX13-211ENST00000496855 IGLV7-43P04211 117 aa2.71□□□□□ -1.98
SNX13-211ENST00000496855 UBBP0CG47 229 aa2.71□□□□□ -1.98
SNX13-211ENST00000496855 BCL2P10415 239 aa2.71□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms