RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, human

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATPAF2-208	ENST00000496852	THYN1	Q9P016	225 aa		10.86	□□□□□ -0.67
ATPAF2-208	ENST00000496852	BORCS7-ASMT	A0A0B4J1R7	106 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	IGHV3-21	A0A0B4J1V1	117 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852		I3L2K1	104 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	NDUFB8	O95169	186 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	OPRK1	P41145	380 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	TPPP2	P59282	170 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	KIAA0141	Q14154	515 aa	Predicted RBP	10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	AWAT1	Q58HT5	328 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	RPL7L1	Q6DKI1	246 aa	Known RBP	10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	C19orf24	Q9BVV8	132 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	FNDC4	Q9H6D8	234 aa	Predicted RBP	10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	WFDC1	Q9HC57	220 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	FBXL7	Q9UJT9	491 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	ATR	Q13535	2644 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	FAM223B	A6NKX1	122 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852		K7EIM0	57 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	DFFB	O76075	338 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	SCAF4	O95104	1147 aa	Known RBP	10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	IFNA5	P01569	189 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	RPLP1	P05386	114 aa	Known RBP	10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	KRTAP10-3	P60369	221 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	ATP6V1F	Q16864	119 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	FAM223A	Q8IWN6	122 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	OR4X2	Q8NGF9	303 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	ATP5S	Q99766	215 aa		10.85	□□□□□ -0.67
ATPAF2-208	ENST00000496852	UBE2L5P	A0A1B0GUS4	154 aa		10.84	□□□□□ -0.67
ATPAF2-208	ENST00000496852	MT-CO2	P00403	227 aa		10.84	□□□□□ -0.67
ATPAF2-208	ENST00000496852	IGHV3-48	P01763	117 aa		10.84	□□□□□ -0.67
ATPAF2-208	ENST00000496852	CD69	Q07108	199 aa		10.84	□□□□□ -0.67
ATPAF2-208	ENST00000496852	EXOSC2	Q13868	293 aa	Known RBP	10.84	□□□□□ -0.67
ATPAF2-208	ENST00000496852	MLANA	Q16655	118 aa		10.84	□□□□□ -0.67
ATPAF2-208	ENST00000496852	C15orf32	Q32M92	178 aa		10.84	□□□□□ -0.67
ATPAF2-208	ENST00000496852	SLC51B	Q86UW2	128 aa		10.84	□□□□□ -0.67
ATPAF2-208	ENST00000496852	SCGB1C1	Q8TD33	95 aa		10.84	□□□□□ -0.67
ATPAF2-208	ENST00000496852	WFDC12	Q8WWY7	111 aa		10.84	□□□□□ -0.67
ATPAF2-208	ENST00000496852	UQCC1	Q9NVA1	299 aa		10.84	□□□□□ -0.67
ATPAF2-208	ENST00000496852	MFSD2B	A6NFX1	497 aa		10.83	□□□□□ -0.68
ATPAF2-208	ENST00000496852	CD28	P10747	220 aa		10.83	□□□□□ -0.68
ATPAF2-208	ENST00000496852	AKR1C1	Q04828	323 aa		10.83	□□□□□ -0.68
ATPAF2-208	ENST00000496852	ZNF266	Q14584	549 aa		10.83	□□□□□ -0.68
ATPAF2-208	ENST00000496852	ZNF491	Q8N8L2	437 aa		10.83	□□□□□ -0.68
ATPAF2-208	ENST00000496852	HSD17B11	Q8NBQ5	300 aa		10.83	□□□□□ -0.68
ATPAF2-208	ENST00000496852	VN1R17P	Q8TDU5	208 aa		10.83	□□□□□ -0.68
ATPAF2-208	ENST00000496852	SCARB1	Q8WTV0	552 aa		10.83	□□□□□ -0.68
ATPAF2-208	ENST00000496852	TMEM158	Q8WZ71	300 aa		10.83	□□□□□ -0.68
ATPAF2-208	ENST00000496852	USMG5	Q96IX5	58 aa		10.83	□□□□□ -0.68
ATPAF2-208	ENST00000496852	TMEM147	Q9BVK8	224 aa		10.83	□□□□□ -0.68
ATPAF2-208	ENST00000496852	CYTL1	Q9NRR1	136 aa		10.83	□□□□□ -0.68
ATPAF2-208	ENST00000496852	JTB	O76095	146 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	GPX4	P36969	197 aa	Predicted RBP	10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	EIF5A	P63241	154 aa	Known RBP	10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	ATP5G2	Q06055	141 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	ETFRF1	Q6IPR1	90 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	ACY3	Q96HD9	319 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	SLC35E1	Q96K37	410 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	CXorf58	Q96LI9	332 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	UBE2E2	Q96LR5	201 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	FBN1	P35555	2871 aa	Known RBP	10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852		A0A0G2JLM5	398 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	RPS10-NUDT3	A0A1W2PQS6	291 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	TPT1	P13693	172 aa	Known RBP	10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	DLK1	P80370	383 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	SLC16A13	Q7RTY0	426 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	C11orf44	Q8N8P7	122 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	ZNF502	Q8TBZ5	544 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	CACNG8	Q8WXS5	425 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	MRPL36	Q9P0J6	103 aa	Known RBP	10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852		S4R3C0	116 aa		10.82	□□□□□ -0.68
ATPAF2-208	ENST00000496852	FGF7	P21781	194 aa		10.81	□□□□□ -0.68
ATPAF2-208	ENST00000496852	CDX1	P47902	265 aa	Predicted RBP	10.81	□□□□□ -0.68
ATPAF2-208	ENST00000496852	HIST2H2BD	Q6DRA6	164 aa		10.81	□□□□□ -0.68
ATPAF2-208	ENST00000496852	ACSM6	Q6P461	480 aa		10.81	□□□□□ -0.68
ATPAF2-208	ENST00000496852	UBAC2	Q8NBM4	344 aa		10.81	□□□□□ -0.68
ATPAF2-208	ENST00000496852	ST8SIA2	Q92186	375 aa		10.81	□□□□□ -0.68
ATPAF2-208	ENST00000496852	EEF1AKMT3	Q96AZ1	226 aa		10.81	□□□□□ -0.68
ATPAF2-208	ENST00000496852	CCDC140	Q96MF4	163 aa		10.81	□□□□□ -0.68
ATPAF2-208	ENST00000496852	CITED2	Q99967	270 aa	Predicted RBP	10.81	□□□□□ -0.68
ATPAF2-208	ENST00000496852	GNB4	Q9HAV0	340 aa		10.81	□□□□□ -0.68
ATPAF2-208	ENST00000496852	NPVF	Q9HCQ7	196 aa		10.81	□□□□□ -0.68
ATPAF2-208	ENST00000496852	C21orf62	Q9NYP8	219 aa		10.81	□□□□□ -0.68
ATPAF2-208	ENST00000496852	FNDC10	F2Z333	226 aa		10.8	□□□□□ -0.68
ATPAF2-208	ENST00000496852		F8W735	103 aa	Predicted RBP	10.8	□□□□□ -0.68
ATPAF2-208	ENST00000496852	IGHV3-11	P01762	117 aa		10.8	□□□□□ -0.68
ATPAF2-208	ENST00000496852	FCGR2B	P31994	310 aa	Predicted RBP	10.8	□□□□□ -0.68
ATPAF2-208	ENST00000496852	GAMT	Q14353	236 aa		10.8	□□□□□ -0.68
ATPAF2-208	ENST00000496852	ZNF343	Q6P1L6	599 aa		10.8	□□□□□ -0.68
ATPAF2-208	ENST00000496852	BAP18	Q8IXM2	172 aa		10.8	□□□□□ -0.68
ATPAF2-208	ENST00000496852	GGACT	Q9BVM4	153 aa		10.8	□□□□□ -0.68
ATPAF2-208	ENST00000496852	TRBV7-1	A0A0A6YYK4	115 aa		10.79	□□□□□ -0.68
ATPAF2-208	ENST00000496852	TCRBV4S1A1T	A0A5B7	111 aa		10.79	□□□□□ -0.68
ATPAF2-208	ENST00000496852	IGHV3-23	P01764	117 aa		10.79	□□□□□ -0.68
ATPAF2-208	ENST00000496852	MFAP4	P55083	255 aa		10.79	□□□□□ -0.68
ATPAF2-208	ENST00000496852	RIPPLY3	P57055	190 aa		10.79	□□□□□ -0.68
ATPAF2-208	ENST00000496852	BTNL8	Q6UX41	500 aa		10.79	□□□□□ -0.68
ATPAF2-208	ENST00000496852	TMEM116	Q8NCL8	245 aa		10.79	□□□□□ -0.68
ATPAF2-208	ENST00000496852	OR4X1	Q8NH49	305 aa		10.79	□□□□□ -0.68
ATPAF2-208	ENST00000496852	NPIPB3	Q92617	1050 aa		10.79	□□□□□ -0.68
ATPAF2-208	ENST00000496852	ATP6V0B	Q99437	205 aa		10.79	□□□□□ -0.68
ATPAF2-208	ENST00000496852	TXN2	Q99757	166 aa		10.79	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 44 ms