RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 FOXH1O75593 365 aa3.9□□□□□ -1.78
PRKD3-210ENST00000494667 HOXB4P17483 251 aaPredicted RBP3.9□□□□□ -1.78
PRKD3-210ENST00000494667 MPV17P39210 176 aa3.9□□□□□ -1.78
PRKD3-210ENST00000494667 KIR2DL1P43626 348 aaPredicted RBP3.9□□□□□ -1.78
PRKD3-210ENST00000494667 KIR2DS2P43631 304 aa3.9□□□□□ -1.78
PRKD3-210ENST00000494667 ARL4DP49703 201 aa3.9□□□□□ -1.78
PRKD3-210ENST00000494667 SRYQ05066 204 aa3.9□□□□□ -1.78
PRKD3-210ENST00000494667 LY6DQ14210 128 aa3.9□□□□□ -1.78
PRKD3-210ENST00000494667 CARD17Q5XLA6 110 aa3.9□□□□□ -1.78
PRKD3-210ENST00000494667 RBPMS2Q6ZRY4 209 aaKnown RBP3.9□□□□□ -1.78
PRKD3-210ENST00000494667 SPXQ9BT56 116 aa3.9□□□□□ -1.78
PRKD3-210ENST00000494667 KCNS2Q9ULS6 477 aa3.9□□□□□ -1.78
PRKD3-210ENST00000494667 FOXA2Q9Y261 457 aaPredicted RBP3.9□□□□□ -1.78
PRKD3-210ENST00000494667 TCRBV4S1A1TA0A5B7 111 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 CELA3AP09093 270 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 PRR30Q53SZ7 412 aaPredicted RBP3.9□□□□□ -1.79
PRKD3-210ENST00000494667 ZNF329Q86UD4 541 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 Q8TCH9 128 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 SH2D7A6NKC9 451 aaPredicted RBP3.9□□□□□ -1.79
PRKD3-210ENST00000494667 ZNF785A8K8V0 405 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 C17orf98A8MV24 154 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 RBMXL2O75526 392 aaKnown RBP3.9□□□□□ -1.79
PRKD3-210ENST00000494667 FSTL3O95633 263 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 APOA2P02652 100 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 NHLRC4P0CG21 123 aaPredicted RBP3.9□□□□□ -1.79
PRKD3-210ENST00000494667 C8orf88P0DMB2 117 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 EVI2AP22794 236 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 OTX2P32243 289 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 PLGLB1Q02325 96 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 WFDC2Q14508 124 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 CFAP126Q5VTH2 177 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 MIR17HGQ75NE6 70 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 RPS19BP1Q86WX3 136 aaKnown RBP3.9□□□□□ -1.79
PRKD3-210ENST00000494667 MRPL43Q8N983 215 aaKnown RBP3.9□□□□□ -1.79
PRKD3-210ENST00000494667 OR10X1Q8NGY0 326 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 RNF183Q96D59 192 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 IL23AQ9NPF7 189 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 POLDIP2Q9Y2S7 368 aa3.9□□□□□ -1.79
PRKD3-210ENST00000494667 AMMECR1Q9Y4X0 333 aaPredicted RBP3.9□□□□□ -1.79
PRKD3-210ENST00000494667 H3BML4 177 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 J3QT63 122 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 PEX7O00628 323 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 LTAP01374 205 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 TMEM196Q5HYL7 178 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 CEND1Q8N111 149 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 PRR7Q8TB68 274 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 PIGCQ92535 297 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 A0A087WX48 190 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 NKX2-8O15522 239 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 SPINK8P0C7L1 97 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 ZNF32P17041 273 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 CA6P23280 308 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 RPL32P62910 135 aaKnown RBP3.89□□□□□ -1.79
PRKD3-210ENST00000494667 PSG5Q15238 335 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 GAGE13Q4V321 117 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 Q6AWC8 147 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 TRAT1Q6PIZ9 186 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 MOGAT3Q86VF5 341 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.89□□□□□ -1.79
PRKD3-210ENST00000494667 ZC2HC1AQ96GY0 325 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 ZNF488Q96MN9 340 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 SLC25A2Q9BXI2 301 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 TMEM140Q9NV12 185 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 RHODO00212 210 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 NCR2O95944 276 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 FBLP22087 321 aaKnown RBP3.89□□□□□ -1.79
PRKD3-210ENST00000494667 MEOX1P50221 254 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 SLC25A48Q6ZT89 311 aaKnown RBP3.89□□□□□ -1.79
PRKD3-210ENST00000494667 OR5AN1Q8NGI8 311 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 TMEM158Q8WZ71 300 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 HARBI1Q96MB7 349 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 NABP2Q9BQ15 211 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 SERTAD4Q9NUC0 356 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 TMEM14BQ9NUH8 114 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 AP5S1Q9NUS5 200 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 C15orf61A6NNL5 157 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 SPINK4O60575 86 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 CA1P00915 261 aaPredicted RBP3.89□□□□□ -1.79
PRKD3-210ENST00000494667 TCTAP57738 103 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 SLC35B1P78383 322 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 RRN3P1Q2M238 152 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 CACNG8Q8WXS5 425 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 PLPPR2Q96GM1 343 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 FMC1Q96HJ9 113 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 TMUB1Q9BVT8 246 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 ZNF355PQ9NSJ1 428 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 OCIAD1Q9NX40 245 aa3.89□□□□□ -1.79
PRKD3-210ENST00000494667 A0A1W2PNR3 127 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 OOEPA6NGQ2 149 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 UQCRFS1P47985 274 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 CCL11P51671 97 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 FXYD2P54710 66 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 GNG3P63215 75 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 PATE1Q8WXA2 126 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 DDB2Q92466 427 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 RPEQ96AT9 228 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 GCM1Q9NP62 436 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 TMEM8BA6NDV4 472 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 TMEM262E9PQX1 116 aa3.88□□□□□ -1.79
PRKD3-210ENST00000494667 ASIPP42127 132 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms