RNA–Protein interactions for RNA: ENST00000492741.5

PSPC1-204, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 1,709 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-204ENST00000492741 IGLV1-40P01703 118 aa17.21■□□□□ 0.35
PSPC1-204ENST00000492741 IGHG4P01861 327 aa17.21■□□□□ 0.35
PSPC1-204ENST00000492741 C15orf32Q32M92 178 aa17.21■□□□□ 0.35
PSPC1-204ENST00000492741 TEX38Q6PEX7 206 aa17.21■□□□□ 0.35
PSPC1-204ENST00000492741 SCARB1Q8WTV0 552 aa17.21■□□□□ 0.35
PSPC1-204ENST00000492741 C16orf95Q9H693 158 aa17.21■□□□□ 0.35
PSPC1-204ENST00000492741 SLA2Q9H6Q3 261 aa17.21■□□□□ 0.35
PSPC1-204ENST00000492741 FNDC10F2Z333 226 aa17.2■□□□□ 0.34
PSPC1-204ENST00000492741 EIF5AP63241 154 aaKnown RBP17.2■□□□□ 0.34
PSPC1-204ENST00000492741 VWC2Q2TAL6 325 aa17.2■□□□□ 0.34
PSPC1-204ENST00000492741 C10orf99Q6UWK7 81 aa17.2■□□□□ 0.34
PSPC1-204ENST00000492741 UBAC2Q8NBM4 344 aa17.2■□□□□ 0.34
PSPC1-204ENST00000492741 NPIPB3Q92617 1050 aa17.2■□□□□ 0.34
PSPC1-204ENST00000492741 FAM223BA6NKX1 122 aa17.19■□□□□ 0.34
PSPC1-204ENST00000492741 FGF7P21781 194 aa17.19■□□□□ 0.34
PSPC1-204ENST00000492741 RAB9AP51151 201 aa17.19■□□□□ 0.34
PSPC1-204ENST00000492741 RND2P52198 227 aa17.19■□□□□ 0.34
PSPC1-204ENST00000492741 ATP5G2Q06055 141 aa17.19■□□□□ 0.34
PSPC1-204ENST00000492741 TREML4Q6UXN2 200 aa17.19■□□□□ 0.34
PSPC1-204ENST00000492741 FAM223AQ8IWN6 122 aa17.19■□□□□ 0.34
PSPC1-204ENST00000492741 HSD17B11Q8NBQ5 300 aa17.19■□□□□ 0.34
PSPC1-204ENST00000492741 CXorf58Q96LI9 332 aa17.19■□□□□ 0.34
PSPC1-204ENST00000492741 KLK15Q9H2R5 256 aa17.19■□□□□ 0.34
PSPC1-204ENST00000492741 MAST4O15021 2626 aa17.19■□□□□ 0.34
PSPC1-204ENST00000492741 NDUFA7O95182 113 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 TPT1P13693 172 aaKnown RBP17.18■□□□□ 0.34
PSPC1-204ENST00000492741 KLK9Q2XQG4 91 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 LCNL1Q6ZST4 164 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 TMEM144Q7Z5S9 345 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 OR4F5Q8NH21 305 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 LINC01006Q8NI28 216 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 WDR61Q9GZS3 305 aaKnown RBP17.18■□□□□ 0.34
PSPC1-204ENST00000492741 KLK9Q9UKQ9 250 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 MFSD2BA6NFX1 497 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 BRI3O95415 125 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 IGHV3-23P01764 117 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 MFAP4P55083 255 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 TEPPQ6URK8 271 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 BTNL8Q6UX41 500 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 KLHDC1Q8N7A1 406 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 VN1R17PQ8TDU5 208 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 C21orf62Q9NYP8 219 aa17.18■□□□□ 0.34
PSPC1-204ENST00000492741 MRPL36Q9P0J6 103 aaKnown RBP17.18■□□□□ 0.34
PSPC1-204ENST00000492741 TMEM89A2RUT3 159 aa17.17■□□□□ 0.34
PSPC1-204ENST00000492741 PSMB8P28062 276 aa17.17■□□□□ 0.34
PSPC1-204ENST00000492741 Q56UQ5 140 aa17.17■□□□□ 0.34
PSPC1-204ENST00000492741 TMEM116Q8NCL8 245 aa17.17■□□□□ 0.34
PSPC1-204ENST00000492741 EEF1AKMT3Q96AZ1 226 aa17.17■□□□□ 0.34
PSPC1-204ENST00000492741 USMG5Q96IX5 58 aa17.17■□□□□ 0.34
PSPC1-204ENST00000492741 WDR83OSQ9Y284 106 aa17.17■□□□□ 0.34
PSPC1-204ENST00000492741 A0A0G2JLM5 398 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 ZFP92A6NM28 416 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 ELANEP08246 267 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 NPBWR1P48145 328 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 FOXE3Q13461 319 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 RAB31Q13636 194 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 BAP18Q8IXM2 172 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 ZNF709Q8N972 641 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 OR5AU1Q8NGC0 362 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 OR4X1Q8NH49 305 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 ST8SIA2Q92186 375 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 HAX1O00165 279 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 COMMD1Q8N668 190 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 STOML3Q8TAV4 291 aa17.16■□□□□ 0.34
PSPC1-204ENST00000492741 PARD6GQ9BYG4 376 aaPredicted RBP17.16■□□□□ 0.34
PSPC1-204ENST00000492741 GNG7O60262 68 aa17.15■□□□□ 0.34
PSPC1-204ENST00000492741 MPDU1O75352 247 aa17.15■□□□□ 0.34
PSPC1-204ENST00000492741 RUNX1Q01196 453 aa17.15■□□□□ 0.34
PSPC1-204ENST00000492741 RNF114Q9Y508 228 aa17.15■□□□□ 0.34
PSPC1-204ENST00000492741 TRBV7-1A0A0A6YYK4 115 aa17.14■□□□□ 0.33
PSPC1-204ENST00000492741 OR4X2Q8NGF9 303 aa17.14■□□□□ 0.33
PSPC1-204ENST00000492741 RSG1Q9BU20 258 aa17.14■□□□□ 0.33
PSPC1-204ENST00000492741 CLN5O75503 358 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 IGHV3-11P01762 117 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 RPLP1P05386 114 aaKnown RBP17.13■□□□□ 0.33
PSPC1-204ENST00000492741 ATP6V0CP27449 155 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 OR10J1P30954 320 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 CAMLGP49069 296 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 GNPNAT1Q96EK6 184 aaPredicted RBP17.13■□□□□ 0.33
PSPC1-204ENST00000492741 GINS3Q9BRX5 216 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 NPCDR1Q9BY65 106 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 LSM4Q9Y4Z0 139 aaKnown RBP17.13■□□□□ 0.33
PSPC1-204ENST00000492741 NF1P21359 2839 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 IGKV1OR2-108A0A075B7D4 117 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 OR2T8A6NH00 312 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 C17orf112F2Z3M2 114 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 AGPAT2O15120 278 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 MDKP21741 143 aaPredicted RBP17.13■□□□□ 0.33
PSPC1-204ENST00000492741 CLEC19AQ6UXS0 136 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 ZNF502Q8TBZ5 544 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 MGST2Q99735 147 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 TXN2Q99757 166 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 SLC25A32Q9H2D1 315 aa17.13■□□□□ 0.33
PSPC1-204ENST00000492741 CLPSL1A2RUU4 121 aa17.12■□□□□ 0.33
PSPC1-204ENST00000492741 SCGB2A1O75556 95 aa17.12■□□□□ 0.33
PSPC1-204ENST00000492741 CLEC3BP05452 202 aa17.12■□□□□ 0.33
PSPC1-204ENST00000492741 SH3BGRL3Q9H299 93 aa17.12■□□□□ 0.33
PSPC1-204ENST00000492741 ARV1Q9H2C2 271 aa17.12■□□□□ 0.33
PSPC1-204ENST00000492741 GAR1Q9NY12 217 aaKnown RBP17.12■□□□□ 0.33
PSPC1-204ENST00000492741 TRAV30A0A087WSZ9 112 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms