RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 FAM3AP98173 230 aa1.98□□□□□ -2.09
SNX13-209ENST00000492626 FUT5Q11128 374 aa1.98□□□□□ -2.09
SNX13-209ENST00000492626 TIMM23BQ5SRD1 257 aa1.98□□□□□ -2.09
SNX13-209ENST00000492626 SCGB1D4Q6XE38 83 aa1.98□□□□□ -2.09
SNX13-209ENST00000492626 C1orf174Q8IYL3 243 aa1.98□□□□□ -2.09
SNX13-209ENST00000492626 MORN4Q8NDC4 146 aa1.98□□□□□ -2.09
SNX13-209ENST00000492626 C1orf54Q8WWF1 131 aa1.98□□□□□ -2.09
SNX13-209ENST00000492626 ANAPC11Q9NYG5 84 aa1.98□□□□□ -2.09
SNX13-209ENST00000492626 ALG5Q9Y673 324 aa1.98□□□□□ -2.09
SNX13-209ENST00000492626 NUP214P35658 2090 aaPredicted RBP1.97□□□□□ -2.09
SNX13-209ENST00000492626 IGHV2-26A0A0B4J1V2 119 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 TMEM150BA6NC51 233 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 PRORSD1PA6NEY8 169 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 COLCA2A8K830 154 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 B4DEV8 164 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 H0Y980 276 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 OR4E1P0C645 316 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 GTF2F2P13984 249 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 RPS3P23396 243 aaKnown RBP eCLIP1.97□□□□□ -2.09
SNX13-209ENST00000492626 PSMA1P25786 263 aaKnown RBP1.97□□□□□ -2.09
SNX13-209ENST00000492626 S100PP25815 95 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 COILP38432 576 aaPredicted RBP1.97□□□□□ -2.09
SNX13-209ENST00000492626 GLO1Q04760 184 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 SURF2Q15527 256 aaPredicted RBP1.97□□□□□ -2.09
SNX13-209ENST00000492626 CENPWQ5EE01 88 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 TNFAIP8L2Q6P589 184 aaPredicted RBP1.97□□□□□ -2.09
SNX13-209ENST00000492626 DNM1P34Q6PK57 102 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 MFSD8Q8NHS3 518 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 TMEM106AQ96A25 262 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 STAB1Q9NY15 2570 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 TCRBV3S1A0A5B6 114 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 SIX6O95475 246 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 NSA2O95478 260 aaKnown RBP1.97□□□□□ -2.09
SNX13-209ENST00000492626 IFNGP01579 166 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 DNAH10OSP0CZ25 163 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 PSME3P61289 254 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 SP6Q3SY56 376 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 PDZD9Q8IXQ8 264 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 HS3ST5Q8IZT8 346 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 FER1L6-AS1Q8NA97 138 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 OR2T4Q8NH00 348 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 RNF133Q8WVZ7 376 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 KRTAP4-2Q9BYR5 136 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 KCNIP2Q9NS61 270 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 AP4S1Q9Y587 144 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 ARID1AO14497 2285 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 DNAH17Q9UFH2 4485 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 DLEU1O43261 78 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 FGF16O43320 207 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 CD74P04233 296 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 LINC00614P0C842 121 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 CD28P10747 220 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 ZNF25P17030 456 aaPredicted RBP1.97□□□□□ -2.09
SNX13-209ENST00000492626 ERP29P30040 261 aaKnown RBP1.97□□□□□ -2.09
SNX13-209ENST00000492626 IFNGR2P38484 337 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 ETV6P41212 452 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 RAB2AP61019 212 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 IMPG1Q17R60 797 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 MRPL2Q5T653 305 aaKnown RBP1.97□□□□□ -2.09
SNX13-209ENST00000492626 SIGLECL1Q8N7X8 197 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 APCDD1LQ8NCL9 501 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 CANT1Q8WVQ1 401 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 ACOT12Q8WYK0 555 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 CCL17Q92583 94 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 MIXL1Q9H2W2 232 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 RYR1P21817 5038 aa1.97□□□□□ -2.09
SNX13-209ENST00000492626 EFCAB10A6NFE3 127 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 CHP2O43745 196 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 TYMSP04818 313 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 CTXN2P0C2S0 81 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 PTHLHP12272 177 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 COX4I1P13073 169 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 CXCL2P19875 107 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 DDTP30046 118 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 RBP2P50120 134 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 RPL14P50914 215 aaKnown RBP1.96□□□□□ -2.1
SNX13-209ENST00000492626 MP68P56378 58 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 SMAGPQ0VAQ4 97 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 FABP9Q0Z7S8 132 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 TBC1D28Q2M2D7 210 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 HENMT1Q5T8I9 393 aaKnown RBP1.96□□□□□ -2.1
SNX13-209ENST00000492626 ANKRD12Q6UB98 2062 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 TMEM91Q6ZNR0 172 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 SH2D6Q7Z4S9 175 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 C15orf56Q8N910 161 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 OR8J3Q8NGG0 315 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 SMIM19Q96E16 107 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 LSM5Q9Y4Y9 91 aaKnown RBP1.96□□□□□ -2.1
SNX13-209ENST00000492626 ZNF706Q9Y5V0 76 aaPredicted RBP1.96□□□□□ -2.1
SNX13-209ENST00000492626 VPS13BQ7Z7G8 4022 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 MPZL1O95297 269 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 ISG15P05161 165 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 UCHL3P15374 230 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 CDK6Q00534 326 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 NTM-AS1Q6ZSK4 140 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 RASSF6Q6ZTQ3 369 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 UMODL1-AS1Q8N2C9 162 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 OR1M1Q8NGA1 313 aa1.96□□□□□ -2.1
SNX13-209ENST00000492626 CPNE2Q96FN4 548 aaPredicted RBP1.96□□□□□ -2.1
SNX13-209ENST00000492626 KRTAP9-8Q9BYQ0 159 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms