RNA–Protein interactions for RNA: ENST00000492423.5

COPS7B-222, Transcript of COP9 signalosome subunit 7B, human

TSL 2

Gene COPS7B, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COPS7B-222	ENST00000492423	IGHV3-21	A0A0B4J1V1	117 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	SMCO3	A2RU48	225 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	RGS13	O14921	159 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	CRLF1	O75462	422 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	MT-CO2	P00403	227 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	RNASE1	P07998	156 aa	Known RBP	11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	FAM157C	P0CG43	387 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	FGF7	P21781	194 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	DEFA5	Q01523	94 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	GAMT	Q14353	236 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	ALKAL2	Q6UX46	152 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	ZNF680	Q8NEM1	530 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	OR2T6	Q8NHC8	308 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	TAF15	Q92804	592 aa	Known RBP eCLIP	11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	SLC35E1	Q96K37	410 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	SH3BGRL3	Q9H299	93 aa		11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	LSM4	Q9Y4Z0	139 aa	Known RBP	11.64	□□□□□ -0.55
COPS7B-222	ENST00000492423	RPS10-NUDT3	A0A1W2PQS6	291 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	OR2J3	O76001	311 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	NDUFB8	O95169	186 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	IGHV3-48	P01763	117 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	SPP1	P10451	314 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	AKR1C1	Q04828	323 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	ETFRF1	Q6IPR1	90 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	BTNL8	Q6UX41	500 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	TMEM144	Q7Z5S9	345 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	PHYHIPL	Q96FC7	376 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	MGST2	Q99735	147 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	RSG1	Q9BU20	258 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	NPVF	Q9HCQ7	196 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	ZFHX3	Q15911	3703 aa		11.63	□□□□□ -0.55
COPS7B-222	ENST00000492423	IGKV1OR2-108	A0A075B7D4	117 aa		11.62	□□□□□ -0.55
COPS7B-222	ENST00000492423	MFSD2B	A6NFX1	497 aa		11.62	□□□□□ -0.55
COPS7B-222	ENST00000492423	BRI3	O95415	125 aa		11.62	□□□□□ -0.55
COPS7B-222	ENST00000492423	HIST1H1B	P16401	226 aa	Known RBP	11.62	□□□□□ -0.55
COPS7B-222	ENST00000492423	RND2	P52198	227 aa		11.62	□□□□□ -0.55
COPS7B-222	ENST00000492423		Q6ZSV7	163 aa		11.62	□□□□□ -0.55
COPS7B-222	ENST00000492423	THAP8	Q8NA92	274 aa		11.62	□□□□□ -0.55
COPS7B-222	ENST00000492423	SCGB1C1	Q8TD33	95 aa		11.62	□□□□□ -0.55
COPS7B-222	ENST00000492423	SCARB1	Q8WTV0	552 aa		11.62	□□□□□ -0.55
COPS7B-222	ENST00000492423	TMED6	Q8WW62	240 aa		11.62	□□□□□ -0.55
COPS7B-222	ENST00000492423	NPCDR1	Q9BY65	106 aa		11.62	□□□□□ -0.55
COPS7B-222	ENST00000492423	SLC25A32	Q9H2D1	315 aa		11.62	□□□□□ -0.55
COPS7B-222	ENST00000492423	FN1	P02751	2386 aa	Known RBP	11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	IGKV1D-37	A0A075B6S9	117 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423		H3BUA1	57 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	CYB5B	O43169	146 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	TSPAN9	O75954	239 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	IFNA7	P01567	189 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	IGLV1-40	P01703	118 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	SEC11B	P0C7V7	166 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	RPL15	P61313	204 aa	Known RBP	11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	FAM74A1	Q5RGS3	127 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	ZNF767P	Q75MW2	155 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	CENPV	Q7Z7K6	275 aa	Predicted RBP	11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	NPIPB3	Q92617	1050 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	ACY3	Q96HD9	319 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	PSMG3	Q9BT73	122 aa	Predicted RBP	11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	GGTLC1	Q9BX51	225 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	SERTAD4	Q9NUC0	356 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	FBXL7	Q9UJT9	491 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	TIMM9	Q9Y5J7	89 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423		S4R3C0	116 aa		11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423	NIPBL	Q6KC79	2804 aa	eCLIP	11.61	□□□□□ -0.55
COPS7B-222	ENST00000492423		F8W735	103 aa	Predicted RBP	11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	MPDU1	O75352	247 aa		11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	RHOG	P84095	191 aa		11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	ACSM6	Q6P461	480 aa		11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	TEPP	Q6URK8	271 aa		11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	C10orf99	Q6UWK7	81 aa		11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	TMEM116	Q8NCL8	245 aa		11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	OR4X1	Q8NH49	305 aa		11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	GNPNAT1	Q96EK6	184 aa	Predicted RBP	11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	MS4A10	Q96PG2	267 aa		11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	JMJD8	Q96S16	334 aa		11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	ZNF355P	Q9NSJ1	428 aa		11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	THYN1	Q9P016	225 aa		11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	UBQLN2	Q9UHD9	624 aa		11.6	□□□□□ -0.55
COPS7B-222	ENST00000492423	AGPAT2	O15120	278 aa		11.59	□□□□□ -0.55
COPS7B-222	ENST00000492423	TRGV3	P03979	118 aa		11.59	□□□□□ -0.55
COPS7B-222	ENST00000492423	OR10J1	P30954	320 aa		11.59	□□□□□ -0.55
COPS7B-222	ENST00000492423	NECAP1	Q8NC96	275 aa		11.59	□□□□□ -0.55
COPS7B-222	ENST00000492423	OR2G3	Q8NGZ4	309 aa		11.59	□□□□□ -0.55
COPS7B-222	ENST00000492423	VN1R17P	Q8TDU5	208 aa		11.59	□□□□□ -0.55
COPS7B-222	ENST00000492423	SVEP1	Q4LDE5	3571 aa		11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	FAM223B	A6NKX1	122 aa		11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	IGHG4	P01861	327 aa		11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	CAMLG	P49069	296 aa		11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	SULT1A2	P50226	295 aa		11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	MIC13	Q5XKP0	118 aa		11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	TMEM182	Q6ZP80	229 aa	Predicted RBP	11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	ZNF329	Q86UD4	541 aa		11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	FAM223A	Q8IWN6	122 aa		11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	ZNF502	Q8TBZ5	544 aa		11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	TRGV9	Q99603	122 aa		11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	KLK15	Q9H2R5	256 aa		11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	C21orf62	Q9NYP8	219 aa		11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	SLC45A2	Q9UMX9	530 aa		11.58	□□□□□ -0.56
COPS7B-222	ENST00000492423	TCRBV4S1A1T	A0A5B7	111 aa		11.57	□□□□□ -0.56
COPS7B-222	ENST00000492423	TMEM89	A2RUT3	159 aa		11.57	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms