RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 CARD17Q5XLA6 110 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 Q6ZS92 163 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 OOSP2Q86WS3 158 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 NUP35Q8NFH5 326 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 TMEM54Q969K7 222 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 HARBI1Q96MB7 349 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 ANAPC13Q9BS18 74 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 NDFIP1Q9BT67 221 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 PKIBQ9C010 78 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 VCX2Q9H322 139 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 TMEM167BQ9NRX6 74 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 DEPPQ9NTK1 212 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 IL36RNQ9UBH0 155 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 SLC25A10Q9UBX3 287 aaPredicted RBP3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 UFC1Q9Y3C8 167 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 MED12LQ86YW9 2145 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 A0A1B0GXF2 115 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 B5MCH6 92 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 E9PLD3 99 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 ZG16O60844 167 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 CER1O95813 267 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 CYBAP13498 195 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 FCGR2BP31994 310 aaPredicted RBP3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 TAS2R45P59539 299 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 RPL32P62910 135 aaKnown RBP3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 RPS21P63220 83 aaKnown RBP3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 ZXDAP98168 799 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 RTL8BQ17RB0 113 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 ETDBQ3ZM63 59 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 GAGE13Q4V321 117 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 C10orf128Q5T292 105 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 SH2D6Q7Z4S9 175 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 ZNF611Q8N823 705 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 ATP6V0E2Q8NHE4 81 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 FAM168AQ92567 244 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 IGF2BP2-AS1Q96M15 143 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 HINT2Q9BX68 163 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 KRTAP4-5Q9BYR2 181 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 HRASLS2Q9NWW9 162 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 OR1A1Q9P1Q5 309 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 RALYQ9UKM9 306 aaKnown RBP3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 RTTNQ86VV8 2226 aa3.91□□□□□ -1.78
SNRNP40-206ENST00000489853 NCOR1O75376 2440 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 C15orf62A8K5M9 175 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 LINC00271P0C7V0 271 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 CRYGSP22914 178 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 FASLGP48023 281 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 FGF12P61328 243 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 EFNB3Q15768 340 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 ABHD17BQ5VST6 288 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 MIC13Q5XKP0 118 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 ACP7Q6ZNF0 438 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 ANKRD37Q7Z713 158 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 LINC00596Q86U02 117 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 ZADH2Q8N4Q0 377 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 SMIM20Q8N5G0 67 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 OR1L3Q8NH93 324 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 ZNF747Q9BV97 191 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 C1QTNF5Q9BXJ0 243 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 HIGD1BQ9P298 99 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 B4GALT7Q9UBV7 327 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 MPC1Q9Y5U8 109 aa3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 SOX21Q9Y651 276 aaPredicted RBP3.9□□□□□ -1.78
SNRNP40-206ENST00000489853 TRANK1O15050 2925 aa3.9□□□□□ -1.79
SNRNP40-206ENST00000489853 KMT2EQ8IZD2 1858 aa3.9□□□□□ -1.79
SNRNP40-206ENST00000489853 USP34Q70CQ2 3546 aa3.9□□□□□ -1.79
SNRNP40-206ENST00000489853 LTBP2Q14767 1821 aa3.9□□□□□ -1.79
SNRNP40-206ENST00000489853 LOC102723996A0A087X1L8 192 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 FBLL1A6NHQ2 334 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 EFNA2O43921 213 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 FOXH1O75593 365 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 CNIH1O95406 144 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 MT-ATP8P03928 68 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 CT45A10P0DMU9 189 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 CSN1S1P47710 185 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 CAMPP49913 170 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 ERVK11-1P61568 191 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 HBBP68871 147 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 SRSF1Q07955 248 aaKnown RBP eCLIP3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 FOXI1Q12951 378 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 SLC25A53Q5H9E4 307 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 FAM27BQ5VT28 67 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 ZNF562Q6V9R5 426 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 Q6ZUT4 128 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 MRPL43Q8N983 215 aaKnown RBP3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 WDR31Q8NA23 367 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 PHLDA1Q8WV24 401 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 PIGCQ92535 297 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 MMABQ96EY8 250 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 MGST2Q99735 147 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 SSBP3Q9BWW4 388 aaPredicted RBP3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 TM2D2Q9BX73 214 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 C1QTNF4Q9BXJ3 329 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 TMEM133Q9H2Q1 129 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 DEC1Q9P2X7 70 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 WNT16Q9UBV4 365 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 INSIG2Q9Y5U4 225 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 DMDP11532 3685 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 hCG_38984A0A1B0GV85 526 aa3.89□□□□□ -1.79
SNRNP40-206ENST00000489853 GAGE12JA6NER3 117 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms