RNA–Protein interactions for RNA: ENST00000489772.5

GGA1-222, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 1, humanhuman

TSL 2

Gene GGA1, Length 1,384 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA1-222ENST00000489772 CD81P60033 236 aa8.36□□□□□ -1.07
GGA1-222ENST00000489772 SMCO1Q147U7 214 aa8.36□□□□□ -1.07
GGA1-222ENST00000489772 NMSQ5H8A3 153 aa8.36□□□□□ -1.07
GGA1-222ENST00000489772 BTNL8Q6UX41 500 aa8.36□□□□□ -1.07
GGA1-222ENST00000489772 RBPMS2Q6ZRY4 209 aaKnown RBP8.36□□□□□ -1.07
GGA1-222ENST00000489772 CENPSQ8N2Z9 138 aa8.36□□□□□ -1.07
GGA1-222ENST00000489772 WDR89Q96FK6 387 aaPredicted RBP8.36□□□□□ -1.07
GGA1-222ENST00000489772 TUBA4BQ9H853 241 aa8.36□□□□□ -1.07
GGA1-222ENST00000489772 MLXQ9UH92 298 aa8.36□□□□□ -1.07
GGA1-222ENST00000489772 A0A1B0GU03 582 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 LINC00854A0A1B0GVQ3 168 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 DUXBA0A1W2PPF3 345 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 K7EMT4 169 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 SCGB2A1O75556 95 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 NXPH3O95157 252 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 SFT2D2O95562 160 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 UBE2MP61081 183 aaKnown RBP8.35□□□□□ -1.07
GGA1-222ENST00000489772 BSXQ3C1V8 233 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 ANKRD55Q3KP44 614 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 NOXA1Q86UR1 476 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 SBSPONQ8IVN8 264 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 TMEM61Q8N0U2 210 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 LRTM2Q8N967 370 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 SLC24A4Q8NFF2 622 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 SDHCQ99643 169 aaPredicted RBP8.35□□□□□ -1.07
GGA1-222ENST00000489772 NEURL2Q9BR09 285 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 C7orf50Q9BRJ6 194 aaKnown RBP8.35□□□□□ -1.07
GGA1-222ENST00000489772 C19orf73Q9NVV2 129 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 SELENOKQ9Y6D0 94 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 IGHV3OR16-8A0A075B7F1 116 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 TRAV25A0A0B4J276 109 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 RPS10-NUDT3A0A1W2PQS6 291 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 SCAF4O95104 1147 aaKnown RBP8.35□□□□□ -1.07
GGA1-222ENST00000489772 NDUFB6O95139 128 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 IL7P13232 177 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 TNFRSF9Q07011 255 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 PPP1R1AQ13522 171 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 C2orf83Q53S99 150 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 LAMTOR1Q6IAA8 161 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 SLC16A13Q7RTY0 426 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 OR4X1Q8NH49 305 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 OR1S1Q8NH92 325 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 RNASEH2CQ8TDP1 164 aaKnown RBP8.35□□□□□ -1.07
GGA1-222ENST00000489772 ZMAT4Q9H898 229 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 HSPB7Q9UBY9 170 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 U3KQK5 164 aa8.35□□□□□ -1.07
GGA1-222ENST00000489772 TRAV14DV4A0A0A6YYC5 116 aa8.34□□□□□ -1.07
GGA1-222ENST00000489772 ZNF207O43670 478 aaKnown RBP8.34□□□□□ -1.07
GGA1-222ENST00000489772 TMEM50AO95807 157 aa8.34□□□□□ -1.07
GGA1-222ENST00000489772 CD7P09564 240 aa8.34□□□□□ -1.07
GGA1-222ENST00000489772 NPY1RP25929 384 aa8.34□□□□□ -1.07
GGA1-222ENST00000489772 OR52B4Q8NGK2 314 aa8.34□□□□□ -1.07
GGA1-222ENST00000489772 DTD1Q8TEA8 209 aa8.34□□□□□ -1.07
GGA1-222ENST00000489772 OR10C1Q96KK4 312 aa8.34□□□□□ -1.07
GGA1-222ENST00000489772 TMED3Q9Y3Q3 217 aa8.34□□□□□ -1.07
GGA1-222ENST00000489772 U3KQ87 197 aa8.34□□□□□ -1.07
GGA1-222ENST00000489772 TENM3Q9P273 2699 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 TRAV30A0A087WSZ9 112 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 IGHV7-4-1A0A0J9YVY3 117 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 OR11H12B2RN74 326 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 CLN5O75503 358 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 IFNA10P01566 189 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 SLC25A4P12235 298 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 SLC25A6P12236 298 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 ATP5IP56385 69 aaPredicted RBP8.33□□□□□ -1.08
GGA1-222ENST00000489772 CNPY1Q3B7I2 92 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 ETFRF1Q6IPR1 90 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 TOMM20LQ6UXN7 152 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 ZNF600Q6ZNG1 722 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 LINC00299Q6ZSB3 139 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 TMEM116Q8NCL8 245 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 SPAG8Q99932 426 aaPredicted RBP8.33□□□□□ -1.08
GGA1-222ENST00000489772 GINS3Q9BRX5 216 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 RBKSQ9H477 322 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 FNDC4Q9H6D8 234 aaPredicted RBP8.33□□□□□ -1.08
GGA1-222ENST00000489772 SMPXQ9UHP9 88 aa8.33□□□□□ -1.08
GGA1-222ENST00000489772 STAB2Q8WWQ8 2551 aa8.32□□□□□ -1.08
GGA1-222ENST00000489772 C9orf170A2RU37 121 aa8.32□□□□□ -1.08
GGA1-222ENST00000489772 TSPAN4O14817 238 aa8.32□□□□□ -1.08
GGA1-222ENST00000489772 PITX3O75364 302 aa8.32□□□□□ -1.08
GGA1-222ENST00000489772 HOXB5P09067 269 aa8.32□□□□□ -1.08
GGA1-222ENST00000489772 BMI1P35226 326 aa8.32□□□□□ -1.08
GGA1-222ENST00000489772 MLANAQ16655 118 aa8.32□□□□□ -1.08
GGA1-222ENST00000489772 DEFB125Q8N687 156 aa8.32□□□□□ -1.08
GGA1-222ENST00000489772 COQ8AQ8NI60 647 aa8.32□□□□□ -1.08
GGA1-222ENST00000489772 ZNF414Q96IQ9 312 aa8.32□□□□□ -1.08
GGA1-222ENST00000489772 WWC2-AS2Q96NR7 200 aa8.32□□□□□ -1.08
GGA1-222ENST00000489772 RHPN1-AS1Q9BWJ2 59 aa8.32□□□□□ -1.08
GGA1-222ENST00000489772 FLVCR2Q9UPI3 526 aa8.32□□□□□ -1.08
GGA1-222ENST00000489772 PUS1Q9Y606 427 aaKnown RBP eCLIP8.32□□□□□ -1.08
GGA1-222ENST00000489772 A6NHS1 94 aa8.31□□□□□ -1.08
GGA1-222ENST00000489772 FAM90A26D6RGX4 464 aa8.31□□□□□ -1.08
GGA1-222ENST00000489772 CHEK1O14757 476 aa8.31□□□□□ -1.08
GGA1-222ENST00000489772 MED6O75586 246 aa8.31□□□□□ -1.08
GGA1-222ENST00000489772 OR4E1P0C645 316 aa8.31□□□□□ -1.08
GGA1-222ENST00000489772 BTCP35070 178 aa8.31□□□□□ -1.08
GGA1-222ENST00000489772 DHRS2Q13268 280 aa8.31□□□□□ -1.08
GGA1-222ENST00000489772 C4orf46Q504U0 113 aa8.31□□□□□ -1.08
GGA1-222ENST00000489772 PRSS54Q6PEW0 395 aa8.31□□□□□ -1.08
GGA1-222ENST00000489772 TMEM170AQ8WVE7 144 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms