RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 POLR2GP62487 172 aaKnown RBP eCLIP8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 HBG1P69891 147 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 HBG2P69892 147 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 PRCDQ00LT1 54 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 WT1-ASQ06250 92 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 EGFEM1PQ0D2K5 195 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 FXYD3Q14802 87 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 OR10W1Q8NGF6 305 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 MYOZ3Q8TDC0 251 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 TMEM170AQ8WVE7 144 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 GNPNAT1Q96EK6 184 aaPredicted RBP8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 SMIM8Q96KF7 97 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 UBE2E2Q96LR5 201 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 FAM103A1Q9BTL3 118 aaKnown RBP8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 MAGT1Q9H0U3 335 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 RBKSQ9H477 322 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 CYTL1Q9NRR1 136 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 STRAPQ9Y3F4 350 aaKnown RBP8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 TGP01266 2768 aa8.2□□□□□ -1.1
SCAMP4-208ENST00000489554 DNAH3Q8TD57 4116 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 RAB19A4D1S5 217 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 MSGN1A6NI15 193 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 SYNGR2O43760 224 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 SSSCA1O60232 199 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 IFNA5P01569 189 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 RPL27AP46776 148 aaKnown RBP8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 SPCS3P61009 180 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 GNB1P62873 340 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 EWSR1Q01844 656 aaKnown RBP eCLIP8.19□□□□□ -1.12e-6■■■□□ 17.5
SCAMP4-208ENST00000489554 TMEM267Q0VDI3 215 aaPredicted RBP8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 ATP6V1FQ16864 119 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 ECSCRQ19T08 205 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 DEFB136Q30KP8 78 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 BSXQ3C1V8 233 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 C19orf35Q6ZS72 473 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 ZNF491Q8N8L2 437 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 OR1S2Q8NGQ3 325 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 OR1L8Q8NGR8 309 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 ARPC1AQ92747 370 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 DUX3Q96PT4 197 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 COMMD5Q9GZQ3 224 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 ARV1Q9H2C2 271 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 FKBP11Q9NYL4 201 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 FBXL17Q9UF56 701 aa8.19□□□□□ -1.1
SCAMP4-208ENST00000489554 A0A1W2PN81 502 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 UMAD1C9J7I0 102 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 IFNA17P01571 189 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 AREGP15514 252 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 HOXD3P31249 432 aaPredicted RBP8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 CHRNA7P36544 502 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 SULT1A1P50225 295 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 SULT1A2P50226 295 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 RAB9AP51151 201 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 KRTAP10-11P60412 298 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 RUNX1Q01196 453 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 FHL3Q13643 280 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 AKIRIN2Q53H80 203 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 IL34Q6ZMJ4 242 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 TMEM252Q8N6L7 170 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 ABHD5Q8WTS1 349 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 MARC2Q969Z3 335 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 GINS3Q9BRX5 216 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 KLK15Q9H2R5 256 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 DMRT1Q9Y5R6 373 aa8.18□□□□□ -1.1
SCAMP4-208ENST00000489554 MFSD2BA6NFX1 497 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 I3L521 148 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 SOX15O60248 233 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 RBMXL2O75526 392 aaKnown RBP8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 OR8U8P0C7N1 319 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 APELAP0DMC3 54 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 IAPPP10997 89 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 MFAP2P55001 183 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 RAB2AP61019 212 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 KIAA0141Q14154 515 aaPredicted RBP8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 KLK9Q2XQG4 91 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 C9orf66Q5T8R8 295 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 RPL7L1Q6DKI1 246 aaKnown RBP8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 PVRIGQ6DKI7 326 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 OR11H1Q8NG94 326 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 SCGB1C1Q8TD33 95 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 DTD1Q8TEA8 209 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 OR4C12Q96R67 309 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 SRSF8Q9BRL6 282 aaKnown RBP8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 GNB4Q9HAV0 340 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 PSENENQ9NZ42 101 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 KLK9Q9UKQ9 250 aa8.17□□□□□ -1.1
SCAMP4-208ENST00000489554 FAM24AA6NFZ4 105 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 C15orf62A8K5M9 175 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 PMS2P5A8MQ11 134 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 CEBPZOSA8MTT3 80 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 ZNF705EA8MWA4 302 aaPredicted RBP8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 K7EIL1 84 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 CNIH1O95406 144 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 REG1AP05451 166 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 CRYGCP07315 174 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 RNASE2P10153 161 aaKnown RBP8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 CTRB1P17538 263 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 ATP5IP56385 69 aaPredicted RBP8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 ZNF616Q08AN1 781 aa8.16□□□□□ -1.1
SCAMP4-208ENST00000489554 CTRB2Q6GPI1 263 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms