RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 KRTAP13-4Q3LI77 160 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 PCOTHQ58A44 107 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 DHFR2Q86XF0 187 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 C8orf4Q9NR00 106 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 OSTCQ9NRP0 149 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 GID8Q9NWU2 228 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 CKLFQ9UBR5 152 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 PYCARDQ9ULZ3 195 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 UTP11Q9Y3A2 253 aaKnown RBP1.8□□□□□ -2.12
XRN1-213ENST00000489241 BAHCC1Q9P281 2608 aa1.8□□□□□ -2.12
XRN1-213ENST00000489241 PTPRSQ13332 1948 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 C1orf196B1AJZ1 125 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 C19orf84I3L1E1 186 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 J3QRK9 145 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 IFNA1P01562 189 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 METTL15P1P0C7V9 234 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 CRYGAP11844 174 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 PSMD8P48556 350 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 KRTAP12-1P59990 96 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 KRTAP12-3P60328 96 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 YPEL3P61236 119 aaPredicted RBP1.79□□□□□ -2.12
XRN1-213ENST00000489241 RHOBP62745 196 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 ZNF345Q14585 488 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 ARHGAP11BQ3KRB8 267 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 LCN15Q6UWW0 184 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 C7orf65Q6ZTY9 151 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 TRAPPC6BQ86SZ2 158 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 ZNF439Q8NDP4 499 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 OR8B3Q8NGG8 313 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 OR5A1Q8NGJ0 315 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 WFDC5Q8TCV5 224 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 ADAT3Q96EY9 351 aaPredicted RBP1.79□□□□□ -2.12
XRN1-213ENST00000489241 AMMECR1Q9Y4X0 333 aaPredicted RBP1.79□□□□□ -2.12
XRN1-213ENST00000489241 MIA2Q96PC5 1412 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 KIAA2026Q5HYC2 2103 aa1.79□□□□□ -2.12
XRN1-213ENST00000489241 MPDZO75970 2070 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 DISP1Q96F81 1524 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 IGKV1-9A0A0C4DH69 117 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 PMP2P02689 132 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 HTR1AP08908 422 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 NNATQ16517 81 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 KHDC3LQ587J8 217 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 Q6ZQT0 140 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 Q6ZRN7 208 aaPredicted RBP1.78□□□□□ -2.12
XRN1-213ENST00000489241 NEK7Q8TDX7 302 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 GINS3Q9BRX5 216 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 TMEM133Q9H2Q1 129 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 MED29Q9NX70 200 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 SS18L2Q9UHA2 77 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 PRNDQ9UKY0 176 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 LHFPL6Q9Y693 200 aa1.78□□□□□ -2.12
XRN1-213ENST00000489241 KIF13BQ9NQT8 1826 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 SMARCA4P51532 1647 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 ZFHX2Q9C0A1 2572 aaPredicted RBP1.77□□□□□ -2.13
XRN1-213ENST00000489241 FMN1Q68DA7 1419 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 A0A0D9SG52 128 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 SDCBPO00560 298 aaPredicted RBP1.77□□□□□ -2.13
XRN1-213ENST00000489241 CYB5BO43169 146 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 TAS2R41P59536 307 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 NCALDP61601 193 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 GNG3P63215 75 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 LYRM7Q5U5X0 104 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 DPPA3Q6W0C5 159 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 AAED1Q7RTV5 226 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 DEFB128Q7Z7B8 93 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 STX12Q86Y82 276 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 SMIM20Q8N5G0 67 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 WFDC11Q8NEX6 87 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 CST9LQ9H4G1 147 aa1.77□□□□□ -2.13
XRN1-213ENST00000489241 RIC1Q4ADV7 1423 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 NCKAP5O14513 1909 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 GREB1Q4ZG55 1949 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 TONSLQ96HA7 1378 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 CPAMD8Q8IZJ3 1885 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 IGKV1D-42A0A075B6H8 117 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 A0A087X0T9 212 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 G3V2T6 193 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 OVOL1O14753 267 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 TCL1BO95988 128 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 IFNA7P01567 189 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 CTSDP07339 412 aaPredicted RBP1.76□□□□□ -2.13
XRN1-213ENST00000489241 RPSAP08865 295 aaKnown RBP1.76□□□□□ -2.13
XRN1-213ENST00000489241 OR4E1P0C645 316 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 COX6A1P12074 109 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 IFI30P13284 250 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 SPI1P17947 270 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 GNG5P63218 68 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 EXOC3-AS1Q8N2X6 119 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 OR4E2Q8NGC2 313 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 OR8D4Q8NGM9 314 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 OR13C6PQ8NH95 151 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 FAM172AQ8WUF8 416 aa1.76□□□□□ -2.13
XRN1-213ENST00000489241 PLXNA3P51805 1871 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 STRCP1A6NGW2 1772 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 DOCK3Q8IZD9 2030 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 GPX2P18283 190 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 FKBP2P26885 142 aaKnown RBP1.75□□□□□ -2.13
XRN1-213ENST00000489241 RNASE4P34096 147 aaKnown RBP1.75□□□□□ -2.13
XRN1-213ENST00000489241 CRYBA4P53673 196 aa1.75□□□□□ -2.13
XRN1-213ENST00000489241 KRTAP12-4P60329 112 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms