RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 KHDC3LQ587J8 217 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 DEFB128Q7Z7B8 93 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 C10orf126Q8N4M7 172 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 SIGLECL1Q8N7X8 197 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 ZNF439Q8NDP4 499 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 FAM172AQ8WUF8 416 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 IMUPQ9GZP8 106 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 OSTCQ9NRP0 149 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 BAIAP2Q9UQB8 552 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 FCGBPQ9Y6R7 5405 aaPredicted RBP1.23□□□□□ -2.21
RFC4-213ENST00000489028 DENND4BO75064 1496 aaPredicted RBP1.23□□□□□ -2.21
RFC4-213ENST00000489028 CUL9Q8IWT3 2517 aa1.23□□□□□ -2.21
RFC4-213ENST00000489028 MPDZO75970 2070 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 COL11A1P12107 1806 aaPredicted RBP1.22□□□□□ -2.21
RFC4-213ENST00000489028 KIF13BQ9NQT8 1826 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 TOPBP1Q92547 1522 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 A0A087X0T9 212 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 TRAV4A0A0B4J268 109 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 SIGLEC16A6NMB1 481 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 TMEM238C9JI98 176 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 TRAPPC2LH3BP13 241 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 AIPO00170 330 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 CYB5BO43169 146 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 OR5F1O95221 314 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 NDUFC2O95298 119 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 IFNA1P01562 189 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 IFI30P13284 250 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 PIGPP57054 158 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 LINC01554Q52M75 96 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 AKR1C8PQ5T2L2 129 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 LCN15Q6UWW0 184 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 LCA10Q71F78 164 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 LINC00471Q8N535 108 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 OR4E2Q8NGC2 313 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 OR4D11Q8NGI4 311 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 OR5A1Q8NGJ0 315 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 SERPINI1Q99574 410 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 HSPB9Q9BQS6 159 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 YIPF3Q9GZM5 350 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 MIXL1Q9H2W2 232 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 NHP2Q9NX24 153 aaKnown RBP1.22□□□□□ -2.21
RFC4-213ENST00000489028 V9GYQ6 96 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 COL4A2P08572 1712 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 ADAMTS7Q9UKP4 1686 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 RIC1Q4ADV7 1423 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 FMN1Q68DA7 1419 aa1.22□□□□□ -2.21
RFC4-213ENST00000489028 COL5A3P25940 1745 aaPredicted RBP1.21□□□□□ -2.22
RFC4-213ENST00000489028 DOCK5Q9H7D0 1870 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 FUOMA2VDF0 154 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 C1orf196B1AJZ1 125 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 CLDN25C9JDP6 229 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 G3V2T6 193 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 ZNF737O75373 536 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 C1QBP02746 253 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 IGKV1-16P04430 117 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 SPI1P17947 270 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 SRP14P37108 136 aaKnown RBP1.21□□□□□ -2.22
RFC4-213ENST00000489028 GNG10P50151 68 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 DEFA3P59666 94 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 RHOBP62745 196 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 EIF5AP63241 154 aaKnown RBP1.21□□□□□ -2.22
RFC4-213ENST00000489028 DEFB103AP81534 67 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 ZNF345Q14585 488 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 ELOBQ15370 118 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 C7orf65Q6ZTY9 151 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 LYG2Q86SG7 212 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 OR8D4Q8NGM9 314 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 OR13C6PQ8NH95 151 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 MBD3L1Q8WWY6 194 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 HIST1H2BLQ99880 126 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 TMEM70Q9BUB7 260 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 GID8Q9NWU2 228 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 EPDR1Q9UM22 224 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 CAMSAP1Q5T5Y3 1602 aa1.21□□□□□ -2.22
RFC4-213ENST00000489028 MALRD1Q5VYJ5 2156 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 C7orf71A4D174 169 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 IBA57-AS1B1ANH7 110 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 H7C1C5 153 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 OVOL1O14753 267 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 CLPSP04118 112 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 OR4E1P0C645 316 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 G0S2P27469 103 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 PHBP35232 272 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 AKR1C3P42330 323 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 ATP5G3P48201 142 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 TCTAP57738 103 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 NCALDP61601 193 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 LCN6P62502 163 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 RHEBQ15382 184 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 SCGB2B2Q4G0G5 96 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 SPANXN5Q5MJ07 72 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 TRIQKQ629K1 86 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 RPS19BP1Q86WX3 136 aaKnown RBP1.2□□□□□ -2.22
RFC4-213ENST00000489028 OR52R1Q8NGF1 315 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 SPACA4Q8TDM5 124 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 SELENOSQ9BQE4 189 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 SH3BGRL3Q9H299 93 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 LYRM2Q9NU23 88 aaPredicted RBP1.2□□□□□ -2.22
RFC4-213ENST00000489028 PRNDQ9UKY0 176 aa1.2□□□□□ -2.22
RFC4-213ENST00000489028 SSR3Q9UNL2 185 aa1.2□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms