RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 TMEM14BQ9NUH8 114 aa15.35■□□□□ 0.05
CCM2-216ENST00000488727 SLC39A9Q9NUM3 307 aa15.35■□□□□ 0.05
CCM2-216ENST00000488727 VAX2Q9UIW0 290 aa15.35■□□□□ 0.05
CCM2-216ENST00000488727 TRAV3A0A0B4J244 114 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 MPDU1O75352 247 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 IL6RP08887 468 aaPredicted RBP15.34■□□□□ 0.05
CCM2-216ENST00000488727 CNTFRP26992 372 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 TAGLN2P37802 199 aaKnown RBP15.34■□□□□ 0.05
CCM2-216ENST00000488727 DLK1P80370 383 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 KRTAP24-1Q3LI83 254 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 FFAR4Q5NUL3 377 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 OR4A47Q6IF82 309 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 PDPNQ86YL7 162 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 ZNF709Q8N972 641 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 TVP23CQ96ET8 276 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 RHOVQ96L33 236 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 HEYLQ9NQ87 328 aaPredicted RBP15.34■□□□□ 0.05
CCM2-216ENST00000488727 ZFP92A6NM28 416 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 AMY1AP04745 511 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 FGF8P55075 233 aaPredicted RBP15.34■□□□□ 0.05
CCM2-216ENST00000488727 FAM90A2PQ658T7 463 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 C16orf82Q7Z2V1 217 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.34■□□□□ 0.05
CCM2-216ENST00000488727 OR10G9Q8NGN4 311 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 OR10G7Q8NGN6 311 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 NIPSNAP3BQ9BS92 247 aa15.34■□□□□ 0.05
CCM2-216ENST00000488727 ACTR3CQ9C0K3 210 aaPredicted RBP15.34■□□□□ 0.05
CCM2-216ENST00000488727 IFNA10P01566 189 aa15.33■□□□□ 0.04
CCM2-216ENST00000488727 RPL15P61313 204 aaKnown RBP15.33■□□□□ 0.04
CCM2-216ENST00000488727 HSPE1P61604 102 aaKnown RBP15.33■□□□□ 0.04
CCM2-216ENST00000488727 C1RLQ9NZP8 487 aa15.33■□□□□ 0.04
CCM2-216ENST00000488727 MOB4Q9Y3A3 225 aa15.33■□□□□ 0.04
CCM2-216ENST00000488727 HOXA1P49639 335 aaPredicted RBP15.32■□□□□ 0.04
CCM2-216ENST00000488727 RPS16P62249 146 aaKnown RBP15.32■□□□□ 0.04
CCM2-216ENST00000488727 RTL8BQ17RB0 113 aa15.32■□□□□ 0.04
CCM2-216ENST00000488727 YPEL4Q96NS1 127 aa15.32■□□□□ 0.04
CCM2-216ENST00000488727 NCBP2LA6PVI3 153 aaKnown RBP15.31■□□□□ 0.04
CCM2-216ENST00000488727 RAB11AP62491 216 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 BLCAPP62952 87 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 MMDQ15546 238 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 ACOT6Q3I5F7 207 aaPredicted RBP15.31■□□□□ 0.04
CCM2-216ENST00000488727 Q6ZS46 218 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 C5orf56Q8N8D9 126 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 Q8N9W7 124 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 OR4C13Q8NGP0 309 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 FLYWCH2Q96CP2 140 aaKnown RBP15.31■□□□□ 0.04
CCM2-216ENST00000488727 PRNDQ9UKY0 176 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 ZNF257Q9Y2Q1 563 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 SH2D7A6NKC9 451 aaPredicted RBP15.31■□□□□ 0.04
CCM2-216ENST00000488727 B4DEV8 164 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 SEC14L6B5MCN3 397 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 RRHO14718 337 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 PNRC1Q12796 327 aaPredicted RBP15.31■□□□□ 0.04
CCM2-216ENST00000488727 TMEM177Q53S58 311 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 Q6ZSV7 163 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 TMEM170AQ8WVE7 144 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 SLC25A22Q9H936 323 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 MANBALQ9NQG1 85 aa15.31■□□□□ 0.04
CCM2-216ENST00000488727 UPK2O00526 184 aa15.3■□□□□ 0.04
CCM2-216ENST00000488727 CYB5BO43169 146 aa15.3■□□□□ 0.04
CCM2-216ENST00000488727 CEBPGP53567 150 aa15.3■□□□□ 0.04
CCM2-216ENST00000488727 RAB5BP61020 215 aa15.3■□□□□ 0.04
CCM2-216ENST00000488727 NPBQ8NG41 125 aa15.3■□□□□ 0.04
CCM2-216ENST00000488727 ISOC2Q96AB3 205 aa15.3■□□□□ 0.04
CCM2-216ENST00000488727 RNF5Q99942 180 aa15.3■□□□□ 0.04
CCM2-216ENST00000488727 NPFFR1Q9GZQ6 430 aa15.3■□□□□ 0.04
CCM2-216ENST00000488727 BIN3Q9NQY0 253 aa15.3■□□□□ 0.04
CCM2-216ENST00000488727 SRRM4A7MD48 611 aaKnown RBP15.29■□□□□ 0.04
CCM2-216ENST00000488727 NBR2O15453 112 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 NDUFA3O95167 84 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 OR2C1O95371 312 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 IGLV2-23P01705 113 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 OPRK1P41145 380 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 HARBI1Q96MB7 349 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 BET1LQ9NYM9 111 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 CXorf65A6NEN9 183 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 C1orf196B1AJZ1 125 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 FNDC10F2Z333 226 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 M0QZK8 103 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 RAB5AP20339 215 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 NPY1RP25929 384 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 MEF2BQ02080 365 aaPredicted RBP15.29■□□□□ 0.04
CCM2-216ENST00000488727 TREML4Q6UXN2 200 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 SLC24A4Q8NFF2 622 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 OSR1Q8TAX0 266 aaPredicted RBP15.29■□□□□ 0.04
CCM2-216ENST00000488727 RAB24Q969Q5 203 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 ZNF702PQ9H963 129 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 ENY2Q9NPA8 101 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 KCNIP2Q9NS61 270 aa15.29■□□□□ 0.04
CCM2-216ENST00000488727 TSPAN9O75954 239 aa15.28■□□□□ 0.04
CCM2-216ENST00000488727 CDC34P49427 236 aaPredicted RBP15.28■□□□□ 0.04
CCM2-216ENST00000488727 PSMB3P49720 205 aa15.28■□□□□ 0.04
CCM2-216ENST00000488727 PRCDQ00LT1 54 aa15.28■□□□□ 0.04
CCM2-216ENST00000488727 PSG5Q15238 335 aa15.28■□□□□ 0.04
CCM2-216ENST00000488727 FBXL15Q9H469 300 aa15.28■□□□□ 0.04
CCM2-216ENST00000488727 OR51B2Q9Y5P1 312 aa15.28■□□□□ 0.04
CCM2-216ENST00000488727 TMEM250H0YL14 139 aa15.27■□□□□ 0.04
CCM2-216ENST00000488727 NDUFA7O95182 113 aa15.27■□□□□ 0.04
CCM2-216ENST00000488727 LGALS7P47929 136 aa15.27■□□□□ 0.04
CCM2-216ENST00000488727 ATP5IP56385 69 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms