RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 TMEM68Q96MH6 324 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 WDR83OSQ9Y284 106 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 FBXO7Q9Y3I1 522 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 TNCP24821 2201 aa9.51□□□□□ -0.89
HLA-DOB-209ENST00000488325 IGHV7-81A0A0B4J1V7 117 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 DNAJC9-AS1A6NH13 148 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 ZNF705EA8MWA4 302 aaPredicted RBP9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 PRH1P02810 166 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 REG1AP05451 166 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 DEFA4P12838 97 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 OPRK1P41145 380 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 RUNX1Q01196 453 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 DEFB112Q30KQ8 113 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 BTNL8Q6UX41 500 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 RBMS3Q6XE24 437 aaKnown RBP9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 TMEM182Q6ZP80 229 aaPredicted RBP9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 SLC16A13Q7RTY0 426 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 TMEM219Q86XT9 240 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 SIGLECL1Q8N7X8 197 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 SH3BGRL3Q9H299 93 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 PFDN2Q9UHV9 154 aa9.5□□□□□ -0.89
HLA-DOB-209ENST00000488325 LINC00862A6NCI5 91 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 NPIPB5A8MRT5 1133 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 MBP02144 154 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 PRB2P02812 416 aaPredicted RBP9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 CRYGCP07315 174 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 CTRB1P17538 263 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 CAMLGP49069 296 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 LY6EQ16553 131 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 ARSJQ5FYB0 599 aaPredicted RBP9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 CTRB2Q6GPI1 263 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 TEPPQ6URK8 271 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 DPPA3Q6W0C5 159 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 TMEM144Q7Z5S9 345 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 CENPVQ7Z7K6 275 aaPredicted RBP9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 BCL6BQ8N143 479 aaPredicted RBP9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 WFDC12Q8WWY7 111 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 MISP3Q96FF7 219 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 RSG1Q9BU20 258 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 WNT10AQ9GZT5 417 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 PARP11Q9NR21 331 aa9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 SOX21Q9Y651 276 aaPredicted RBP9.49□□□□□ -0.89
HLA-DOB-209ENST00000488325 APELAP0DMC3 54 aa9.48□□□□□ -0.89
HLA-DOB-209ENST00000488325 NDPQ00604 133 aa9.48□□□□□ -0.89
HLA-DOB-209ENST00000488325 TTC9CQ8N5M4 171 aa9.48□□□□□ -0.89
HLA-DOB-209ENST00000488325 PCNPQ8WW12 178 aaKnown RBP9.48□□□□□ -0.89
HLA-DOB-209ENST00000488325 FAM103A1Q9BTL3 118 aaKnown RBP9.48□□□□□ -0.89
HLA-DOB-209ENST00000488325 NPCDR1Q9BY65 106 aa9.48□□□□□ -0.89
HLA-DOB-209ENST00000488325 MED9Q9NWA0 146 aa9.48□□□□□ -0.89
HLA-DOB-209ENST00000488325 MDFIC2A0A1B0GVS7 189 aa9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 NUDT19A8MXV4 375 aa9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 RNASE1P07998 156 aaKnown RBP9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 HIST1H1BP16401 226 aaKnown RBP9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 IER3P46695 156 aa9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 BEAN1Q3B7T3 259 aa9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 ACOT6Q3I5F7 207 aaPredicted RBP9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 TMEM41BQ5BJD5 291 aa9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 UNQ5815/PRO19632Q6UWF5 114 aa9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 Q6YL49 198 aa9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 Q6ZRG5 221 aa9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 FAM110DQ8TAY7 271 aaPredicted RBP9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 FAM213BQ8TBF2 198 aa9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 HSPB9Q9BQS6 159 aa9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 PRDM13Q9H4Q3 707 aa9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 THYN1Q9P016 225 aa9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 LSM4Q9Y4Z0 139 aaKnown RBP9.47□□□□□ -0.89
HLA-DOB-209ENST00000488325 TEX46H3BTG2 121 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 ATP6V0E1O15342 81 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 IGHV4-59P01825 116 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 HBE1P02100 147 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 CRIP2P52943 208 aaPredicted RBP9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 RAB2AP61019 212 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 GAMTQ14353 236 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 C9orf152Q5JTZ5 239 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 FFAR4Q5NUL3 377 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 PXDC1Q5TGL8 231 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 ASPHD1Q5U4P2 390 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 COMMD7Q86VX2 200 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 LFNGQ8NES3 379 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 CXorf58Q96LI9 332 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 MGST2Q99735 147 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 CITED1Q99966 193 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 GGTLC1Q9BX51 225 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 PLA2G2EQ9NZK7 142 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 VPREB3Q9UKI3 123 aa9.46□□□□□ -0.9
HLA-DOB-209ENST00000488325 COL7A1Q02388 2944 aa9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 AGPAT2O15120 278 aa9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 TSPAN15O95858 294 aa9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 MT-CO2P00403 227 aa9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 EGR2P11161 476 aaPredicted RBP9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 RPL29P47914 159 aaKnown RBP9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 MFAP2P55001 183 aa9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 ELLP55199 621 aaPredicted RBP9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 ZNF616Q08AN1 781 aa9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 ECSCRQ19T08 205 aa9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 AKIRIN2Q53H80 203 aa9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 SLC35E3Q7Z769 313 aa9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 COMMD1Q8N668 190 aa9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 THAP8Q8NA92 274 aa9.45□□□□□ -0.9
HLA-DOB-209ENST00000488325 ACY3Q96HD9 319 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms