RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 IGKV1-17P01599 117 aa10.91□□□□□ -0.66
MCF2L-228ENST00000487354 PMP2P02689 132 aa10.91□□□□□ -0.66
MCF2L-228ENST00000487354 ZNF705DP0CH99 300 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-228ENST00000487354 ZNF705BP0CI00 300 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-228ENST00000487354 NAT1P18440 290 aa10.91□□□□□ -0.66
MCF2L-228ENST00000487354 NPPCP23582 126 aa10.91□□□□□ -0.66
MCF2L-228ENST00000487354 TNP2Q05952 138 aa10.91□□□□□ -0.66
MCF2L-228ENST00000487354 PHLDA2Q53GA4 152 aa10.91□□□□□ -0.66
MCF2L-228ENST00000487354 PSMG4Q5JS54 123 aa10.91□□□□□ -0.66
MCF2L-228ENST00000487354 GLMPQ8WWB7 406 aa10.91□□□□□ -0.66
MCF2L-228ENST00000487354 MRGPRFQ96AM1 343 aa10.91□□□□□ -0.66
MCF2L-228ENST00000487354 FAM212BQ9NTI7 297 aaPredicted RBP10.91□□□□□ -0.66
MCF2L-228ENST00000487354 XCL2Q9UBD3 114 aa10.91□□□□□ -0.66
MCF2L-228ENST00000487354 A0A1W2PS18 150 aa10.9□□□□□ -0.66
MCF2L-228ENST00000487354 INS-IGF2F8WCM5 200 aa10.9□□□□□ -0.66
MCF2L-228ENST00000487354 P0C879 139 aa10.9□□□□□ -0.66
MCF2L-228ENST00000487354 RNASE2P10153 161 aaKnown RBP10.9□□□□□ -0.66
MCF2L-228ENST00000487354 MXD1Q05195 221 aa10.9□□□□□ -0.66
MCF2L-228ENST00000487354 C1orf134Q5TEV5 83 aa10.9□□□□□ -0.66
MCF2L-228ENST00000487354 UBE2DNLQ8IWF7 75 aa10.9□□□□□ -0.66
MCF2L-228ENST00000487354 CMTM1Q8IZ96 169 aa10.9□□□□□ -0.66
MCF2L-228ENST00000487354 TSPAN14Q8NG11 270 aa10.9□□□□□ -0.66
MCF2L-228ENST00000487354 OR4A16Q8NH70 328 aa10.9□□□□□ -0.66
MCF2L-228ENST00000487354 METTL26Q96S19 204 aa10.9□□□□□ -0.66
MCF2L-228ENST00000487354 NEU1Q99519 415 aa10.9□□□□□ -0.66
MCF2L-228ENST00000487354 C16orf90A8MZG2 172 aa10.89□□□□□ -0.67
MCF2L-228ENST00000487354 H3BMM0 161 aa10.89□□□□□ -0.67
MCF2L-228ENST00000487354 CLN5O75503 358 aa10.89□□□□□ -0.67
MCF2L-228ENST00000487354 MLANAQ16655 118 aa10.89□□□□□ -0.67
MCF2L-228ENST00000487354 RNF212Q495C1 297 aa10.89□□□□□ -0.67
MCF2L-228ENST00000487354 IDNKQ5T6J7 187 aa10.89□□□□□ -0.67
MCF2L-228ENST00000487354 H2BFWTQ7Z2G1 175 aa10.89□□□□□ -0.67
MCF2L-228ENST00000487354 TBC1D26Q86UD7 250 aa10.89□□□□□ -0.67
MCF2L-228ENST00000487354 FAM210BQ96KR6 192 aa10.89□□□□□ -0.67
MCF2L-228ENST00000487354 IFT46Q9NQC8 304 aa10.89□□□□□ -0.67
MCF2L-228ENST00000487354 HELTA6NFD8 242 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 IFNA21P01568 189 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 IFNA17P01571 189 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 IGKV1-5P01602 117 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 NPY1RP25929 384 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 PSMB9P28065 219 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 ERHP84090 104 aaKnown RBP10.88□□□□□ -0.67
MCF2L-228ENST00000487354 DHRS2Q13268 280 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 TIGITQ495A1 244 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 KCTD21Q4G0X4 260 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 SOHLH1Q5JUK2 328 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 C16orf54Q6UWD8 224 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 LYSMD2Q8IV50 215 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 SPARTQ8N0X7 666 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 Q8N1X5 172 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 OR4X1Q8NH49 305 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 CNBD2Q96M20 576 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 DIABLOQ9NR28 239 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 DKK2Q9UBU2 259 aa10.88□□□□□ -0.67
MCF2L-228ENST00000487354 A0A0B4J293 547 aa10.87□□□□□ -0.67
MCF2L-228ENST00000487354 FAM90A26D6RGX4 464 aa10.87□□□□□ -0.67
MCF2L-228ENST00000487354 SPART-AS1P0CW21 52 aa10.87□□□□□ -0.67
MCF2L-228ENST00000487354 GABARAPL2P60520 117 aa10.87□□□□□ -0.67
MCF2L-228ENST00000487354 BSXQ3C1V8 233 aa10.87□□□□□ -0.67
MCF2L-228ENST00000487354 GDF5OSQ5U4N7 250 aa10.87□□□□□ -0.67
MCF2L-228ENST00000487354 OR5H2Q8NGV7 314 aa10.87□□□□□ -0.67
MCF2L-228ENST00000487354 C1QTNF4Q9BXJ3 329 aa10.87□□□□□ -0.67
MCF2L-228ENST00000487354 BLOC1S6Q9UL45 172 aa10.87□□□□□ -0.67
MCF2L-228ENST00000487354 SSR3Q9UNL2 185 aa10.87□□□□□ -0.67
MCF2L-228ENST00000487354 ANKRD65E5RJM6 399 aa10.86□□□□□ -0.67
MCF2L-228ENST00000487354 HLA-DRB4P13762 266 aa10.86□□□□□ -0.67
MCF2L-228ENST00000487354 HRH1P35367 487 aa10.86□□□□□ -0.67
MCF2L-228ENST00000487354 EMP1P54849 157 aa10.86□□□□□ -0.67
MCF2L-228ENST00000487354 TAS2R46P59540 309 aa10.86□□□□□ -0.67
MCF2L-228ENST00000487354 DEFB1P60022 68 aa10.86□□□□□ -0.67
MCF2L-228ENST00000487354 HLA-DRB4X5D2U9 266 aa10.86□□□□□ -0.67
MCF2L-228ENST00000487354 TAS2R20P59543 309 aa10.85□□□□□ -0.67
MCF2L-228ENST00000487354 USF2Q15853 346 aaPredicted RBP10.85□□□□□ -0.67
MCF2L-228ENST00000487354 FAM222AQ5U5X8 452 aa10.85□□□□□ -0.67
MCF2L-228ENST00000487354 TMEM88Q6PEY1 159 aa10.85□□□□□ -0.67
MCF2L-228ENST00000487354 ZNF709Q8N972 641 aa10.85□□□□□ -0.67
MCF2L-228ENST00000487354 OR6F1Q8NGZ6 308 aa10.85□□□□□ -0.67
MCF2L-228ENST00000487354 CORTO00230 105 aa10.84□□□□□ -0.67
MCF2L-228ENST00000487354 IGLC1P0CG04 106 aa10.84□□□□□ -0.67
MCF2L-228ENST00000487354 HLA-DMAP28067 261 aa10.84□□□□□ -0.67
MCF2L-228ENST00000487354 SNCAP37840 140 aa10.84□□□□□ -0.67
MCF2L-228ENST00000487354 OPRK1P41145 380 aa10.84□□□□□ -0.67
MCF2L-228ENST00000487354 RPL5P46777 297 aaKnown RBP10.84□□□□□ -0.67
MCF2L-228ENST00000487354 IZUMO2Q6UXV1 221 aa10.84□□□□□ -0.67
MCF2L-228ENST00000487354 SLC35G3Q8N808 338 aa10.84□□□□□ -0.67
MCF2L-228ENST00000487354 TMEM230Q96A57 120 aa10.84□□□□□ -0.67
MCF2L-228ENST00000487354 NIPSNAP3BQ9BS92 247 aa10.84□□□□□ -0.67
MCF2L-228ENST00000487354 SEPSECSQ9HD40 501 aaKnown RBP10.84□□□□□ -0.67
MCF2L-228ENST00000487354 A0A0G2JRQ6 117 aa10.83□□□□□ -0.68
MCF2L-228ENST00000487354 TMEM189A5PLL7 270 aa10.83□□□□□ -0.68
MCF2L-228ENST00000487354 SMIM9A6NGZ8 99 aa10.83□□□□□ -0.68
MCF2L-228ENST00000487354 HNRNPCP07910 306 aaKnown RBP eCLIP10.83□□□□□ -0.68
MCF2L-228ENST00000487354 FXYD7P58549 80 aa10.83□□□□□ -0.68
MCF2L-228ENST00000487354 NUTF2P61970 127 aaKnown RBP10.83□□□□□ -0.68
MCF2L-228ENST00000487354 OXA1LQ15070 435 aa10.83□□□□□ -0.68
MCF2L-228ENST00000487354 NRN1Q9NPD7 142 aa10.83□□□□□ -0.68
MCF2L-228ENST00000487354 RFNGQ9Y644 331 aa10.83□□□□□ -0.68
MCF2L-228ENST00000487354 TGFBR1P36897 503 aa10.82□□□□□ -0.68
MCF2L-228ENST00000487354 ETV6P41212 452 aa10.82□□□□□ -0.68
MCF2L-228ENST00000487354 UCP3P55916 312 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms